G1929378


Basic Information

Item Value
gene id G1929378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 38938060 ~ 38938342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206515
tagtgtcccagaaggaggtgctcttattctccatggactttagtgtcccagaaggaggtgttcttattctccatggactttagtgtcccagaaggaggtgttcttattctccatggactttacagtgtcccagaaggaggtgttcttattctccatggactttagtgtcccagaaggaggtgttcttattctccatggactttagtgtcccagaaggaggtgttcttattctccatggactttagtgtcccagaaggaggtgctcttattctccatggacttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206515 True 283 lncRNA 0.46 1 38938060 38938342

Neighbor

gene id symbol gene type direction distance location
bicra LOC106613370 coding upstream 5485 38845482 ~ 38932575 (+)
bckdha bckdha coding upstream 144590 38770840 ~ 38793470 (+)
tmem91 tmem91 coding upstream 180291 38737469 ~ 38757769 (+)
LOC118944104 NA coding upstream 201476 38711025 ~ 38736584 (+)
ppp1r13l ppp1r13l coding upstream 285049 38590146 ~ 38653011 (+)
ehd2b LOC106613377 coding downstream 5082 38943424 ~ 38977744 (+)
psmd8 psmd8 coding downstream 45265 38983607 ~ 38990269 (+)
spred3 spred3 coding downstream 82458 39020800 ~ 39049676 (+)
LOC118944042 LOC106590898 coding downstream 148769 39087111 ~ 39091233 (+)
LOC110503486 LOC106613381 coding downstream 153177 39091519 ~ 39096712 (+)
G1929370 NA non-coding upstream 17587 38906678 ~ 38920473 (+)
G1929357 NA non-coding upstream 54679 38881375 ~ 38883381 (+)
G1929322 NA non-coding upstream 106683 38830777 ~ 38831377 (+)
G1929228 NA non-coding upstream 120811 38816390 ~ 38817249 (+)
G1929381 NA non-coding downstream 43644 38981986 ~ 38983545 (+)
G1929429 NA non-coding downstream 97674 39036016 ~ 39038600 (+)
G1929432 NA non-coding downstream 107077 39045419 ~ 39046818 (+)
G1929438 NA non-coding downstream 112794 39051136 ~ 39051966 (+)
G1929443 NA non-coding downstream 124011 39062353 ~ 39063481 (+)
G1929196 NA other upstream 424955 38509846 ~ 38513105 (+)
G1929037 NA other upstream 739536 38197898 ~ 38198524 (+)
LOC110511668 LOC106591056 other upstream 830834 38039863 ~ 38121778 (+)
G1929664 NA other downstream 609470 39547812 ~ 39549780 (+)
G1929808 NA other downstream 935936 39874278 ~ 39877275 (+)
G1929816 NA other downstream 949985 39888327 ~ 39889155 (+)
G1929891 NA other downstream 1087593 40025935 ~ 40028517 (+)

Expression


Co-expression Network