Gene
RNA
| Item | Value |
|---|---|
| gene id | G1929429 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 39036016 ~ 39038600 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2206572 | False | 538 | lncRNA | 0.40 | 4 | 39036016 | 39037016 |
| TU2206574 | True | 471 | lncRNA | 0.40 | 3 | 39036016 | 39038600 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psmd8 | psmd8 | coding | upstream | 45747 | 38983607 ~ 38990269 (+) |
| ehd2b | LOC106613377 | coding | upstream | 58272 | 38943424 ~ 38977744 (+) |
| bicra | LOC106613370 | coding | upstream | 103441 | 38845482 ~ 38932575 (+) |
| bckdha | bckdha | coding | upstream | 242546 | 38770840 ~ 38793470 (+) |
| tmem91 | tmem91 | coding | upstream | 278247 | 38737469 ~ 38757769 (+) |
| LOC118944042 | LOC106590898 | coding | downstream | 48511 | 39087111 ~ 39091233 (+) |
| LOC110503486 | LOC106613381 | coding | downstream | 52919 | 39091519 ~ 39096712 (+) |
| LOC110503192 | LOC106613220 | coding | downstream | 168577 | 39207177 ~ 39235039 (+) |
| LOC110516717 | LOC106581405 | coding | downstream | 199580 | 39238180 ~ 39350381 (+) |
| LOC110503405 | NA | coding | downstream | 357423 | 39396023 ~ 39629211 (+) |
| G1929381 | NA | non-coding | upstream | 52471 | 38981986 ~ 38983545 (+) |
| G1929378 | NA | non-coding | upstream | 97674 | 38938060 ~ 38938342 (+) |
| G1929370 | NA | non-coding | upstream | 115543 | 38906678 ~ 38920473 (+) |
| G1929357 | NA | non-coding | upstream | 152635 | 38881375 ~ 38883381 (+) |
| G1929432 | NA | non-coding | downstream | 6819 | 39045419 ~ 39046818 (+) |
| G1929438 | NA | non-coding | downstream | 12536 | 39051136 ~ 39051966 (+) |
| G1929443 | NA | non-coding | downstream | 23753 | 39062353 ~ 39063481 (+) |
| G1929447 | dhx34 | non-coding | downstream | 30910 | 39069510 ~ 39070911 (+) |
| G1929453 | NA | non-coding | downstream | 44098 | 39082698 ~ 39083274 (+) |
| ppp1r13l | ppp1r13l | other | upstream | 400624 | 38590146 ~ 38653011 (+) |
| G1929196 | NA | other | upstream | 522911 | 38509846 ~ 38513105 (+) |
| G1929037 | NA | other | upstream | 837492 | 38197898 ~ 38198524 (+) |
| LOC110511668 | LOC106591056 | other | upstream | 928790 | 38039863 ~ 38121778 (+) |
| G1929664 | NA | other | downstream | 509212 | 39547812 ~ 39549780 (+) |
| G1929808 | NA | other | downstream | 835678 | 39874278 ~ 39877275 (+) |
| G1929816 | NA | other | downstream | 849727 | 39888327 ~ 39889155 (+) |
| G1929891 | NA | other | downstream | 987335 | 40025935 ~ 40028517 (+) |
| G1929901 | NA | other | downstream | 1010764 | 40049364 ~ 40082173 (+) |
