G1929560


Basic Information

Item Value
gene id G1929560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39378049 ~ 39399639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206751
gaatcagtcatagagcccattgctctttatggttgtgaggtctggggtccgctcaccaaccaagacttcagaaaatgggacaaacaccaaattgagactctgcacgcagaattctgcaaaaatatcctccgtgtacaacgtagaacaccaaataatgcatgcagagcagaattaggccgatacccactaattatcataatccagaaaagagccgttaaattctacaaccacctaaaaggaagtgattcccaaaccttccataacagagccatca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206751 True 274 lncRNA 0.43 2 39378049 39399639

Neighbor

gene id symbol gene type direction distance location
LOC110516717 LOC106581405 coding upstream 27668 39238180 ~ 39350381 (+)
LOC110503192 LOC106613220 coding upstream 143010 39207177 ~ 39235039 (+)
LOC110503486 LOC106613381 coding upstream 281337 39091519 ~ 39096712 (+)
LOC118944042 LOC106590898 coding upstream 286816 39087111 ~ 39091233 (+)
spred3 spred3 coding upstream 328373 39020800 ~ 39049676 (+)
LOC110503201 NA coding downstream 231024 39630663 ~ 39632379 (+)
trnat-agu-148 NA coding downstream 365020 39764659 ~ 39764732 (+)
LOC110503199 LOC106613203 coding downstream 401098 39800737 ~ 39809748 (+)
LOC110503406 LOC106581179 coding downstream 1044131 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 1410539 40810178 ~ 40837501 (+)
G1929530 NA non-coding upstream 66075 39311512 ~ 39311974 (+)
G1929526 NA non-coding upstream 86714 39287698 ~ 39291335 (+)
G1929495 NA non-coding upstream 173919 39203865 ~ 39204130 (+)
G1929493 NA non-coding upstream 175111 39202681 ~ 39202938 (+)
G1929468 NA non-coding upstream 230174 39147625 ~ 39147875 (+)
G1929582 NA non-coding downstream 13869 39413508 ~ 39456657 (+)
G1929639 NA non-coding downstream 106300 39505939 ~ 39506415 (+)
G1929649 NA non-coding downstream 127816 39527455 ~ 39528677 (+)
G1929688 NA non-coding downstream 207348 39606987 ~ 39608054 (+)
G1929689 NA non-coding downstream 209107 39608746 ~ 39609637 (+)
bicra LOC106613370 other upstream 445500 38845482 ~ 38932575 (+)
ppp1r13l ppp1r13l other upstream 742657 38590146 ~ 38653011 (+)
G1929196 NA other upstream 864944 38509846 ~ 38513105 (+)
G1929037 NA other upstream 1179525 38197898 ~ 38198524 (+)
G1929664 NA other downstream 148173 39547812 ~ 39549780 (+)
G1929808 NA other downstream 474639 39874278 ~ 39877275 (+)
G1929816 NA other downstream 488688 39888327 ~ 39889155 (+)
G1929891 NA other downstream 626296 40025935 ~ 40028517 (+)
G1929901 NA other downstream 649725 40049364 ~ 40082173 (+)

Expression


Co-expression Network