G1929564


Basic Information

Item Value
gene id G1929564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39389334 ~ 39390556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206758
atgttaatgtttaattttttttattgaacctttatttaactaggcaagtcagttaagaacaaaattcttatttacaatgatggcctattcccggccaaacctggacgacgctaggccaattgtgcgccgccctatgggactgtagtgacgcctcttgcactgagatgcagtgccttagaccgctgtgccacttgggaccATGGACTCCTGAGGGCAATAATACGCCTTCTACTTTGTTTTTTAAATCCTCAGTACAGGTTAATATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTAATATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTAATATAGTAATGCTTTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGCTGTATCCAGCTGGAGCAGACAGGTTACTATAGTAATGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206758 True 615 lncRNA 0.43 2 39389334 39390556

Neighbor

gene id symbol gene type direction distance location
LOC110516717 LOC106581405 coding upstream 38953 39238180 ~ 39350381 (+)
LOC110503192 LOC106613220 coding upstream 154295 39207177 ~ 39235039 (+)
LOC110503486 LOC106613381 coding upstream 292622 39091519 ~ 39096712 (+)
LOC118944042 LOC106590898 coding upstream 298101 39087111 ~ 39091233 (+)
spred3 spred3 coding upstream 339658 39020800 ~ 39049676 (+)
LOC110503405 NA coding downstream 5467 39396023 ~ 39629211 (+)
LOC110503201 NA coding downstream 240107 39630663 ~ 39632379 (+)
trnat-agu-148 NA coding downstream 374103 39764659 ~ 39764732 (+)
LOC110503199 LOC106613203 coding downstream 410181 39800737 ~ 39809748 (+)
LOC110503406 LOC106581179 coding downstream 1053214 40443770 ~ 40535727 (+)
G1929562 NA non-coding upstream 1197 39384958 ~ 39388137 (+)
G1929530 NA non-coding upstream 77360 39311512 ~ 39311974 (+)
G1929526 NA non-coding upstream 97999 39287698 ~ 39291335 (+)
G1929495 NA non-coding upstream 185204 39203865 ~ 39204130 (+)
G1929493 NA non-coding upstream 186396 39202681 ~ 39202938 (+)
G1929582 NA non-coding downstream 22952 39413508 ~ 39456657 (+)
G1929639 NA non-coding downstream 115383 39505939 ~ 39506415 (+)
G1929649 NA non-coding downstream 136899 39527455 ~ 39528677 (+)
G1929688 NA non-coding downstream 216431 39606987 ~ 39608054 (+)
G1929689 NA non-coding downstream 218190 39608746 ~ 39609637 (+)
bicra LOC106613370 other upstream 456785 38845482 ~ 38932575 (+)
ppp1r13l ppp1r13l other upstream 753942 38590146 ~ 38653011 (+)
G1929196 NA other upstream 876229 38509846 ~ 38513105 (+)
G1929037 NA other upstream 1190810 38197898 ~ 38198524 (+)
G1929664 NA other downstream 157256 39547812 ~ 39549780 (+)
G1929808 NA other downstream 483722 39874278 ~ 39877275 (+)
G1929816 NA other downstream 497771 39888327 ~ 39889155 (+)
G1929891 NA other downstream 635379 40025935 ~ 40028517 (+)
G1929901 NA other downstream 658808 40049364 ~ 40082173 (+)

Expression


Co-expression Network