Gene
RNA
| Item | Value |
|---|---|
| gene id | G1929689 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 39608746 ~ 39609637 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2206926 | True | 463 | lncRNA | 0.32 | 2 | 39608746 | 39609637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516717 | LOC106581405 | coding | upstream | 258365 | 39238180 ~ 39350381 (+) |
| LOC110503192 | LOC106613220 | coding | upstream | 373707 | 39207177 ~ 39235039 (+) |
| LOC110503486 | LOC106613381 | coding | upstream | 512034 | 39091519 ~ 39096712 (+) |
| LOC118944042 | LOC106590898 | coding | upstream | 517513 | 39087111 ~ 39091233 (+) |
| spred3 | spred3 | coding | upstream | 559070 | 39020800 ~ 39049676 (+) |
| LOC110503201 | NA | coding | downstream | 21026 | 39630663 ~ 39632379 (+) |
| trnat-agu-148 | NA | coding | downstream | 155022 | 39764659 ~ 39764732 (+) |
| LOC110503199 | LOC106613203 | coding | downstream | 191100 | 39800737 ~ 39809748 (+) |
| LOC110503406 | LOC106581179 | coding | downstream | 834133 | 40443770 ~ 40535727 (+) |
| LOC110503211 | LOC106613213 | coding | downstream | 1200541 | 40810178 ~ 40837501 (+) |
| G1929688 | NA | non-coding | upstream | 692 | 39606987 ~ 39608054 (+) |
| G1929649 | NA | non-coding | upstream | 80069 | 39527455 ~ 39528677 (+) |
| G1929639 | NA | non-coding | upstream | 102331 | 39505939 ~ 39506415 (+) |
| G1929582 | NA | non-coding | upstream | 152089 | 39413508 ~ 39456657 (+) |
| G1929564 | NA | non-coding | upstream | 218190 | 39389334 ~ 39390556 (+) |
| G1929697 | NA | non-coding | downstream | 24910 | 39634547 ~ 39634764 (+) |
| G1929698 | NA | non-coding | downstream | 27129 | 39636766 ~ 39637334 (+) |
| G1929705 | NA | non-coding | downstream | 56501 | 39666138 ~ 39669170 (+) |
| G1929706 | NA | non-coding | downstream | 59970 | 39669607 ~ 39670592 (+) |
| G1929664 | NA | other | upstream | 58966 | 39547812 ~ 39549780 (+) |
| bicra | LOC106613370 | other | upstream | 676197 | 38845482 ~ 38932575 (+) |
| ppp1r13l | ppp1r13l | other | upstream | 973354 | 38590146 ~ 38653011 (+) |
| G1929196 | NA | other | upstream | 1095641 | 38509846 ~ 38513105 (+) |
| G1929808 | NA | other | downstream | 264641 | 39874278 ~ 39877275 (+) |
| G1929816 | NA | other | downstream | 278690 | 39888327 ~ 39889155 (+) |
| G1929891 | NA | other | downstream | 416298 | 40025935 ~ 40028517 (+) |
| G1929901 | NA | other | downstream | 439727 | 40049364 ~ 40082173 (+) |
| G1929909 | NA | other | downstream | 466839 | 40076476 ~ 40078332 (+) |
