G1929697


Basic Information

Item Value
gene id G1929697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39634547 ~ 39634764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206934
agttaacccactgtcccccgggcagttaacccactgtcccccgggcagttaacccactgtcccccgggcagttaacccactgttccccgggcagttaacccactgttccccgggcagtcaacccactgtcccccgggcagttaacccactgttccccaggcagtcaacccactgtcccccgggcagttaacccactgtcccccgggcagttaacccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206934 True 218 lncRNA 0.63 1 39634547 39634764

Neighbor

gene id symbol gene type direction distance location
LOC110503201 NA coding upstream 2168 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 5336 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 284166 39238180 ~ 39350381 (+)
LOC110503192 LOC106613220 coding upstream 399508 39207177 ~ 39235039 (+)
LOC110503486 LOC106613381 coding upstream 537835 39091519 ~ 39096712 (+)
trnat-agu-148 NA coding downstream 129895 39764659 ~ 39764732 (+)
LOC110503199 LOC106613203 coding downstream 165973 39800737 ~ 39809748 (+)
LOC110503406 LOC106581179 coding downstream 809006 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 1175414 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 1327678 40962442 ~ 40972379 (+)
G1929689 NA non-coding upstream 24910 39608746 ~ 39609637 (+)
G1929688 NA non-coding upstream 26493 39606987 ~ 39608054 (+)
G1929649 NA non-coding upstream 105870 39527455 ~ 39528677 (+)
G1929639 NA non-coding upstream 128132 39505939 ~ 39506415 (+)
G1929698 NA non-coding downstream 2002 39636766 ~ 39637334 (+)
G1929705 NA non-coding downstream 31374 39666138 ~ 39669170 (+)
G1929706 NA non-coding downstream 34843 39669607 ~ 39670592 (+)
G1929710 NA non-coding downstream 44525 39679289 ~ 39679564 (+)
G1929724 NA non-coding downstream 86108 39720872 ~ 39723196 (+)
G1929664 NA other upstream 84767 39547812 ~ 39549780 (+)
spred3 spred3 other upstream 585854 39020800 ~ 39049676 (+)
bicra LOC106613370 other upstream 701998 38845482 ~ 38932575 (+)
ppp1r13l ppp1r13l other upstream 999155 38590146 ~ 38653011 (+)
G1929196 NA other upstream 1121442 38509846 ~ 38513105 (+)
G1929808 NA other downstream 239514 39874278 ~ 39877275 (+)
G1929816 NA other downstream 253563 39888327 ~ 39889155 (+)
G1929891 NA other downstream 391171 40025935 ~ 40028517 (+)
G1929901 NA other downstream 414600 40049364 ~ 40082173 (+)
G1929909 NA other downstream 441712 40076476 ~ 40078332 (+)

Expression


Co-expression Network