G1929698


Basic Information

Item Value
gene id G1929698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39636766 ~ 39637334 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206937
aggagacggacccactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgggtggtatagaggagacggacccactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgtgaaacagggaagagactcaggggtatgctaatttggtatagagcagacctaacccttTTTATTacattagtcaaaacaggaacattttacatctggctagaaattactaaagaaatgatctcaacagagaaaaatgtcctcacgTGTGCTACCCatatccccccaatagaatccccatactttaacaatgagcttctccatcctagaggggagaTCACTATTGTaggtattgccttacctctcttatcctacc

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206937 True 406 lncRNA 0.47 3 39636766 39637334

Neighbor

gene id symbol gene type direction distance location
LOC110503201 NA coding upstream 4387 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 7555 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 286385 39238180 ~ 39350381 (+)
LOC110503192 LOC106613220 coding upstream 401727 39207177 ~ 39235039 (+)
LOC110503486 LOC106613381 coding upstream 540054 39091519 ~ 39096712 (+)
trnat-agu-148 NA coding downstream 127325 39764659 ~ 39764732 (+)
LOC110503199 LOC106613203 coding downstream 163403 39800737 ~ 39809748 (+)
LOC110503406 LOC106581179 coding downstream 806436 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 1172844 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 1325108 40962442 ~ 40972379 (+)
G1929697 NA non-coding upstream 2002 39634547 ~ 39634764 (+)
G1929689 NA non-coding upstream 27129 39608746 ~ 39609637 (+)
G1929688 NA non-coding upstream 28712 39606987 ~ 39608054 (+)
G1929649 NA non-coding upstream 108089 39527455 ~ 39528677 (+)
G1929705 NA non-coding downstream 28804 39666138 ~ 39669170 (+)
G1929706 NA non-coding downstream 32273 39669607 ~ 39670592 (+)
G1929710 NA non-coding downstream 41955 39679289 ~ 39679564 (+)
G1929724 NA non-coding downstream 83538 39720872 ~ 39723196 (+)
G1929726 NA non-coding downstream 85924 39723258 ~ 39725950 (+)
G1929664 NA other upstream 86986 39547812 ~ 39549780 (+)
spred3 spred3 other upstream 588073 39020800 ~ 39049676 (+)
bicra LOC106613370 other upstream 704217 38845482 ~ 38932575 (+)
ppp1r13l ppp1r13l other upstream 1001374 38590146 ~ 38653011 (+)
G1929196 NA other upstream 1123661 38509846 ~ 38513105 (+)
G1929808 NA other downstream 236944 39874278 ~ 39877275 (+)
G1929816 NA other downstream 250993 39888327 ~ 39889155 (+)
G1929891 NA other downstream 388601 40025935 ~ 40028517 (+)
G1929901 NA other downstream 412030 40049364 ~ 40082173 (+)
G1929909 NA other downstream 439142 40076476 ~ 40078332 (+)

Expression


Co-expression Network