Gene
RNA
| Item | Value |
|---|---|
| gene id | G1929727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 39727631 ~ 39727961 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2206985 | True | 231 | lncRNA | 0.43 | 2 | 39727631 | 39727961 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503201 | NA | coding | upstream | 95252 | 39630663 ~ 39632379 (+) |
| LOC110503405 | NA | coding | upstream | 98420 | 39396023 ~ 39629211 (+) |
| LOC110516717 | LOC106581405 | coding | upstream | 377250 | 39238180 ~ 39350381 (+) |
| LOC110503192 | LOC106613220 | coding | upstream | 492592 | 39207177 ~ 39235039 (+) |
| LOC110503486 | LOC106613381 | coding | upstream | 630919 | 39091519 ~ 39096712 (+) |
| trnat-agu-148 | NA | coding | downstream | 36698 | 39764659 ~ 39764732 (+) |
| LOC110503199 | LOC106613203 | coding | downstream | 72776 | 39800737 ~ 39809748 (+) |
| LOC110503406 | LOC106581179 | coding | downstream | 715809 | 40443770 ~ 40535727 (+) |
| LOC110503211 | LOC106613213 | coding | downstream | 1082217 | 40810178 ~ 40837501 (+) |
| LOC110503202 | LOC106613212 | coding | downstream | 1234481 | 40962442 ~ 40972379 (+) |
| G1929726 | NA | non-coding | upstream | 1681 | 39723258 ~ 39725950 (+) |
| G1929724 | NA | non-coding | upstream | 4435 | 39720872 ~ 39723196 (+) |
| G1929710 | NA | non-coding | upstream | 48067 | 39679289 ~ 39679564 (+) |
| G1929706 | NA | non-coding | upstream | 57039 | 39669607 ~ 39670592 (+) |
| G1929705 | NA | non-coding | upstream | 58461 | 39666138 ~ 39669170 (+) |
| G1929753 | NA | non-coding | downstream | 51183 | 39779144 ~ 39779519 (+) |
| G1929758 | NA | non-coding | downstream | 84229 | 39812190 ~ 39814400 (+) |
| G1929809 | NA | non-coding | downstream | 145230 | 39873191 ~ 39925528 (+) |
| G1929815 | NA | non-coding | downstream | 157058 | 39885019 ~ 39886406 (+) |
| G1929840 | NA | non-coding | downstream | 194290 | 39922251 ~ 39922705 (+) |
| G1929664 | NA | other | upstream | 177851 | 39547812 ~ 39549780 (+) |
| spred3 | spred3 | other | upstream | 678938 | 39020800 ~ 39049676 (+) |
| bicra | LOC106613370 | other | upstream | 795082 | 38845482 ~ 38932575 (+) |
| ppp1r13l | ppp1r13l | other | upstream | 1092239 | 38590146 ~ 38653011 (+) |
| G1929196 | NA | other | upstream | 1214526 | 38509846 ~ 38513105 (+) |
| G1929808 | NA | other | downstream | 146317 | 39874278 ~ 39877275 (+) |
| G1929816 | NA | other | downstream | 160366 | 39888327 ~ 39889155 (+) |
| G1929891 | NA | other | downstream | 297974 | 40025935 ~ 40028517 (+) |
| G1929901 | NA | other | downstream | 321403 | 40049364 ~ 40082173 (+) |
| G1929909 | NA | other | downstream | 348515 | 40076476 ~ 40078332 (+) |
