G1929840


Basic Information

Item Value
gene id G1929840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39922251 ~ 39922705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2207122
CCGGGATTCTGAGGACTCACGGCTCCAAGACCATTGCCGTTTGCCACATTTCCATTGGCACTCCCAGTTCCATTCCTGTTCGTGTTCCCAGTTCCAGTTCCATTGGCACTCCCACTTCCATTCCTGTTAGTGTTCCCATGGCGATCAGCTGCATCTCTGTCCAccagttcctctcctcctccctcctcgctCTCTTGTCTTCCTTCTTCGTTGGTGTTCTCTCCATTCTCTTGCATCTCGTCCAGCGCTATAGAGAACTGGGCGAGGGTGCGAACCATGTGCAGCATACGGAATAGCCTGTGTGTATCGACACACGATCACACACACCCCCTGCAGACCCAGAAACGGATGACTTGTGTGCCTATACACACACCCACGATACGCCCCCTCAACACAACAGCTCACCCAAAAAa

Function

NR:

description
aspartate and glycine-rich protein-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2207122 True 413 lncRNA 0.54 2 39922251 39922705

Neighbor

gene id symbol gene type direction distance location
LOC110503199 LOC106613203 coding upstream 112503 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 157519 39764659 ~ 39764732 (+)
LOC110503201 NA coding upstream 289872 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 293040 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 571870 39238180 ~ 39350381 (+)
LOC110503406 LOC106581179 coding downstream 521065 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 887473 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 1039737 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 1089973 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 1344062 41266767 ~ 41267279 (+)
G1929815 NA non-coding upstream 35845 39885019 ~ 39886406 (+)
G1929758 NA non-coding upstream 107851 39812190 ~ 39814400 (+)
G1929753 NA non-coding upstream 142732 39779144 ~ 39779519 (+)
G1929727 NA non-coding upstream 194290 39727631 ~ 39727961 (+)
G1929726 NA non-coding upstream 196301 39723258 ~ 39725950 (+)
G1929847 NA non-coding downstream 9028 39931733 ~ 39931937 (+)
G1929848 NA non-coding downstream 9653 39932358 ~ 39932801 (+)
G1929853 NA non-coding downstream 17808 39940513 ~ 39940868 (+)
G1929855 NA non-coding downstream 19790 39942495 ~ 39942714 (+)
G1929857 NA non-coding downstream 24025 39946730 ~ 39946943 (+)
G1929816 NA other upstream 33096 39888327 ~ 39889155 (+)
G1929808 NA other upstream 44976 39874278 ~ 39877275 (+)
G1929664 NA other upstream 372471 39547812 ~ 39549780 (+)
spred3 spred3 other upstream 873558 39020800 ~ 39049676 (+)
bicra LOC106613370 other upstream 989702 38845482 ~ 38932575 (+)
G1929891 NA other downstream 103230 40025935 ~ 40028517 (+)
G1929901 NA other downstream 126659 40049364 ~ 40082173 (+)
G1929909 NA other downstream 153771 40076476 ~ 40078332 (+)
G1929916 NA other downstream 166695 40089400 ~ 40105532 (+)
G1931869 NA other downstream 638507 40561212 ~ 40561906 (+)

Expression


Co-expression Network