G1929847


Basic Information

Item Value
gene id G1929847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39931733 ~ 39931937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2207129
CTACACGCACAGCTAGCTCTCATttagttcttcttcttctgagAACAGACCCAGAACCAGCCATTGAGTCCTAATCTAAACATAGGGGAAACCCATATAGATGGCATCACATCAGAACGCAACGATCAGATGACAGCCGAATCACTGATTTAATATAGACGTACTTATTACAGTCGGATTGTAGATTGTATTACACTCCCCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2207129 True 205 lncRNA 0.43 1 39931733 39931937

Neighbor

gene id symbol gene type direction distance location
LOC110503199 LOC106613203 coding upstream 121985 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 167001 39764659 ~ 39764732 (+)
LOC110503201 NA coding upstream 299354 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 302522 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 581352 39238180 ~ 39350381 (+)
LOC110503406 LOC106581179 coding downstream 511833 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 878241 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 1030505 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 1080741 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 1334830 41266767 ~ 41267279 (+)
G1929809 NA non-coding upstream 6205 39873191 ~ 39925528 (+)
G1929840 NA non-coding upstream 9028 39922251 ~ 39922705 (+)
G1929815 NA non-coding upstream 45327 39885019 ~ 39886406 (+)
G1929758 NA non-coding upstream 117333 39812190 ~ 39814400 (+)
G1929753 NA non-coding upstream 152214 39779144 ~ 39779519 (+)
G1929848 NA non-coding downstream 421 39932358 ~ 39932801 (+)
G1929853 NA non-coding downstream 8576 39940513 ~ 39940868 (+)
G1929855 NA non-coding downstream 10558 39942495 ~ 39942714 (+)
G1929857 NA non-coding downstream 14793 39946730 ~ 39946943 (+)
G1929858 NA non-coding downstream 15754 39947691 ~ 39947920 (+)
G1929816 NA other upstream 42578 39888327 ~ 39889155 (+)
G1929808 NA other upstream 54458 39874278 ~ 39877275 (+)
G1929664 NA other upstream 381953 39547812 ~ 39549780 (+)
spred3 spred3 other upstream 883040 39020800 ~ 39049676 (+)
bicra LOC106613370 other upstream 999184 38845482 ~ 38932575 (+)
G1929891 NA other downstream 93998 40025935 ~ 40028517 (+)
G1929901 NA other downstream 117427 40049364 ~ 40082173 (+)
G1929909 NA other downstream 144539 40076476 ~ 40078332 (+)
G1929916 NA other downstream 157463 40089400 ~ 40105532 (+)
G1931869 NA other downstream 629275 40561212 ~ 40561906 (+)

Expression


Co-expression Network