G1929848


Basic Information

Item Value
gene id G1929848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39932358 ~ 39932801 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2207130
GAAATGACAACTTTTAATTCCCGATATCGGTTTCCTTCTAcgctatatacactgagtgtagaaaacaaatgataaactgggtggttcgagccctgaatgctgattgactgacagctgtggtattTCAGACCATATACCACCGCTATGACAAAGCAttcatttttactgctctaattacattggtaaccagtttataatagtaataaggcacctcgggggtttgtggtatatgaccaattaACCACGGCTGTGTCCAGGCATTCCTTATGCAAGATGCAACgcgaacagcccttagccgtggtatattggccatataaccACACCTCCTTATTGCTTaaatgaacacctgctctttccatgaccaggtgaatccaggtgaaagctatgaccccttattgatgtcacctgttaaatccacttcaatcagtgtagatgaaggggagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2207130 True 444 lncRNA 0.43 1 39932358 39932801

Neighbor

gene id symbol gene type direction distance location
LOC110503199 LOC106613203 coding upstream 122610 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 167626 39764659 ~ 39764732 (+)
LOC110503201 NA coding upstream 299979 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 303147 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 581977 39238180 ~ 39350381 (+)
LOC110503406 LOC106581179 coding downstream 510969 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 877377 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 1029641 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 1079877 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 1333966 41266767 ~ 41267279 (+)
G1929847 NA non-coding upstream 421 39931733 ~ 39931937 (+)
G1929809 NA non-coding upstream 6830 39873191 ~ 39925528 (+)
G1929840 NA non-coding upstream 9653 39922251 ~ 39922705 (+)
G1929815 NA non-coding upstream 45952 39885019 ~ 39886406 (+)
G1929758 NA non-coding upstream 117958 39812190 ~ 39814400 (+)
G1929853 NA non-coding downstream 7712 39940513 ~ 39940868 (+)
G1929855 NA non-coding downstream 9694 39942495 ~ 39942714 (+)
G1929857 NA non-coding downstream 13929 39946730 ~ 39946943 (+)
G1929858 NA non-coding downstream 14890 39947691 ~ 39947920 (+)
G1929859 NA non-coding downstream 15726 39948527 ~ 39948931 (+)
G1929816 NA other upstream 43203 39888327 ~ 39889155 (+)
G1929808 NA other upstream 55083 39874278 ~ 39877275 (+)
G1929664 NA other upstream 382578 39547812 ~ 39549780 (+)
spred3 spred3 other upstream 883665 39020800 ~ 39049676 (+)
bicra LOC106613370 other upstream 999809 38845482 ~ 38932575 (+)
G1929891 NA other downstream 93134 40025935 ~ 40028517 (+)
G1929901 NA other downstream 116563 40049364 ~ 40082173 (+)
G1929909 NA other downstream 143675 40076476 ~ 40078332 (+)
G1929916 NA other downstream 156599 40089400 ~ 40105532 (+)
G1931869 NA other downstream 628411 40561212 ~ 40561906 (+)

Expression


Co-expression Network