G1929915


Basic Information

Item Value
gene id G1929915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40088455 ~ 40095112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2207276
gtgtgttataccttgtgtgtgtgtgtgtgtgttataccttgtgcgtgtgttataccttgtgcgtgtgtgtgtgttataccttgtgcgtgtgtgtgttataccttgtgtgtgtgtgtgtgtgttaaaccttgtgtgtgtgttataccttgtgtgtgtgtgtgttatacattgtgtgtgtgtgtgtgttataccttgtgtgcttgtgtgttataccttgtgtgtgtgtgtgttataccttgtgtgtgtgtttgtgtgttataccttgtgtgtgtttgtgtgttataccttgtgtgtgtgggtgtgttttaacttgtgtgagtgtgtgtgttataccttgtgtgtgttatacaccttgtgtgtgtgtgtgtgttataccttgtgtgtgtgtgtcataacttgtgtgagtgtgtgtgttataacttgtgtgagtgtgtgtgttattacttgtgtgcgtgtgtgtgttataccttgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2207276 True 489 lncRNA 0.41 2 40088455 40095112

Neighbor

gene id symbol gene type direction distance location
LOC110503199 LOC106613203 coding upstream 278707 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 323723 39764659 ~ 39764732 (+)
LOC110503201 NA coding upstream 456076 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 459244 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 738074 39238180 ~ 39350381 (+)
LOC110503406 LOC106581179 coding downstream 348658 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 715066 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 867330 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 917566 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 1171655 41266767 ~ 41267279 (+)
G1929912 NA non-coding upstream 3048 40084269 ~ 40085407 (+)
G1929901 NA non-coding upstream 6282 40049364 ~ 40082173 (+)
G1929904 NA non-coding upstream 33638 40050408 ~ 40054817 (+)
G1929891 NA non-coding upstream 59938 40025935 ~ 40028517 (+)
G1929863 NA non-coding upstream 63334 40020748 ~ 40025121 (+)
G1929916 NA non-coding downstream 8876 40089400 ~ 40105532 (+)
G1929917 NA non-coding downstream 10793 40105905 ~ 40106367 (+)
G1931481 NA non-coding downstream 31699 40126811 ~ 40127276 (+)
G1931482 NA non-coding downstream 33675 40128787 ~ 40129153 (+)
G1931490 NA non-coding downstream 37305 40132417 ~ 40132711 (+)
G1929909 NA other upstream 10123 40076476 ~ 40078332 (+)
G1929816 NA other upstream 199300 39888327 ~ 39889155 (+)
G1929808 NA other upstream 211180 39874278 ~ 39877275 (+)
G1931869 NA other downstream 466100 40561212 ~ 40561906 (+)
G1932319 NA other downstream 1019525 41114637 ~ 41117412 (+)
G1932564 NA other downstream 1234938 41330050 ~ 41338188 (+)
LOC110503413 LOC106613251 other downstream 2199736 42140069 ~ 42335470 (+)
G1933231 LOC106581444 other downstream 2266144 42361256 ~ 42365260 (+)

Expression


Co-expression Network