G1931490


Basic Information

Item Value
gene id G1931490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40132417 ~ 40132711 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2209411
GCGTTCAACGAATCAGCAAGTCAGACATTTCTGAGTTTCATAGTTTCGACTAGCATGTGAACATGTCAACTGtagtggttttccaacagcaaaGCTCAGCTCAACATGGCAGTGTCAACATAGCTTCTAttgagggcctcccgagtggcgcagcggtctaaggcactgcatcgcagtgttgaggcgtcactacagcctggggttcaatCCCATTACTTGGCTtgtcgtgctctagcgactcattgtggtgggccgggcgcctgcaagctgactattgttgtcagttgaacagtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2209411 True 295 lncRNA 0.51 1 40132417 40132711

Neighbor

gene id symbol gene type direction distance location
LOC110503199 LOC106613203 coding upstream 322669 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 367685 39764659 ~ 39764732 (+)
LOC110503201 NA coding upstream 500038 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 503206 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 782036 39238180 ~ 39350381 (+)
LOC110503406 LOC106581179 coding downstream 311059 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 677467 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 829731 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 879967 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 1134056 41266767 ~ 41267279 (+)
G1931482 NA non-coding upstream 3264 40128787 ~ 40129153 (+)
G1931481 NA non-coding upstream 5141 40126811 ~ 40127276 (+)
G1929917 NA non-coding upstream 26050 40105905 ~ 40106367 (+)
G1929916 NA non-coding upstream 26885 40089400 ~ 40105532 (+)
G1929915 NA non-coding upstream 37305 40088455 ~ 40095112 (+)
G1931492 NA non-coding downstream 1601 40134312 ~ 40134601 (+)
G1931504 LOC106562530 non-coding downstream 15932 40148643 ~ 40148979 (+)
G1931506 LOC106612182 non-coding downstream 19608 40152319 ~ 40152724 (+)
G1931515 NA non-coding downstream 23721 40156432 ~ 40156654 (+)
G1931531 NA non-coding downstream 46028 40178739 ~ 40178938 (+)
G1929909 NA other upstream 54085 40076476 ~ 40078332 (+)
G1929901 NA other upstream 80067 40049364 ~ 40082173 (+)
G1929891 NA other upstream 103900 40025935 ~ 40028517 (+)
G1929816 NA other upstream 243262 39888327 ~ 39889155 (+)
G1931869 NA other downstream 428501 40561212 ~ 40561906 (+)
G1932319 NA other downstream 981926 41114637 ~ 41117412 (+)
G1932564 NA other downstream 1197339 41330050 ~ 41338188 (+)
LOC110503413 LOC106613251 other downstream 2162137 42140069 ~ 42335470 (+)
G1933231 LOC106581444 other downstream 2228545 42361256 ~ 42365260 (+)

Expression


Co-expression Network