G1932564


Basic Information

Item Value
gene id G1932564
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41330050 ~ 41338188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210655
ccagctgtctttcaggcattagtcaatgatgtcctgagagacatgctgaacatctttgttttcatttaccttgacgatatcctgattttttcaccgtcactccagattcatcttcagcacgttcgacgtgtcctccagcgccttttagagaattgtctttttgtgaaggctgagaagtgcacttttcatgcctcctccgtcacatttctcggttctgttatttccgctgaaggcattaagatggatcccgctaaggtccaagctgtcattgattggcccgcccctaagtcacgcgtcgagctgcagcgctttctcggcttcgcgaacttctatcgtcgtttcatctgtaatttcggtcaggtggcagctcctctcacagcccttacttctgtcaagacgtgctttaagtggtccgtttccgcccagggagcttttgatctcctcaagaatcgttttacatccgctcctatccttgttacacctgacgtctctagacagttcgttgtcgaggttgacgcgtcagaggtgggcgtgggagccattctttctcagcgctccctctctgacgacaaggtccacccatgcgcgtatttttctcatcgcctgtcgccgtcggaacgtaactatgatgtggg

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210655 True 635 TUCP 0.50 2 41330050 41338188

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 62771 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 204672 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 357671 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 492549 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 794323 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 685294 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 801881 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1385343 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1728099 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1961340 43299528 ~ 43420475 (+)
G1932489 NA non-coding upstream 110266 41219417 ~ 41219784 (+)
G1932447 NA non-coding upstream 118358 41195246 ~ 41211692 (+)
G1932442 NA non-coding upstream 146322 41183519 ~ 41183728 (+)
G1932437 NA non-coding upstream 150415 41179325 ~ 41179635 (+)
G1932436 NA non-coding upstream 150835 41178759 ~ 41179215 (+)
G1932614 NA non-coding downstream 19882 41358070 ~ 41358345 (+)
G1932627 LOC107662719 non-coding downstream 29132 41367320 ~ 41367695 (+)
G1932663 NA non-coding downstream 86051 41424239 ~ 41429949 (+)
G1932773 NA non-coding downstream 170718 41508906 ~ 41509158 (+)
G1932776 NA non-coding downstream 173843 41512031 ~ 41512248 (+)
G1932319 NA other upstream 212638 41114637 ~ 41117412 (+)
G1931869 NA other upstream 768144 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1224518 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1251718 40076476 ~ 40078332 (+)
G1929901 NA other upstream 1277700 40049364 ~ 40082173 (+)
G1933231 LOC106581444 other downstream 1023068 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1051239 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 1157392 42495580 ~ 42500990 (+)
G1933574 NA other downstream 1193530 42531718 ~ 42534983 (+)

Expression


Co-expression Network