G1932939


Basic Information

Item Value
gene id G1932939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41718573 ~ 41718934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211066
ggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggagtgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaatgattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcagaaggtcgcaaagttcaagggggccgaatactttcgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211066 True 362 lncRNA 0.39 1 41718573 41718934

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 451294 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 593195 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 746194 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 881072 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 1182846 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 304548 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 421135 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1004597 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1347353 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1580594 43299528 ~ 43420475 (+)
G1932926 NA non-coding upstream 14540 41703804 ~ 41704033 (+)
G1932918 NA non-coding upstream 22639 41695729 ~ 41695934 (+)
G1932910 NA non-coding upstream 35753 41682584 ~ 41682820 (+)
G1932894 NA non-coding upstream 47572 41670546 ~ 41671001 (+)
G1932868 NA non-coding upstream 56744 41649422 ~ 41661829 (+)
G1932952 NA non-coding downstream 13370 41732304 ~ 41732625 (+)
G1932959 NA non-coding downstream 20690 41739624 ~ 41739938 (+)
G1932961 NA non-coding downstream 22580 41741514 ~ 41741807 (+)
G1932963 NA non-coding downstream 23163 41742097 ~ 41742353 (+)
G1932965 NA non-coding downstream 23907 41742841 ~ 41744467 (+)
G1932564 NA other upstream 380385 41330050 ~ 41338188 (+)
G1932319 NA other upstream 601161 41114637 ~ 41117412 (+)
G1931869 NA other upstream 1156667 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1613041 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1640241 40076476 ~ 40078332 (+)
G1933231 LOC106581444 other downstream 642322 42361256 ~ 42365260 (+)
G1933255 NA other downstream 670493 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 776646 42495580 ~ 42500990 (+)
G1933574 NA other downstream 812784 42531718 ~ 42534983 (+)

Expression


Co-expression Network