G1932961


Basic Information

Item Value
gene id G1932961
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41741514 ~ 41741807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211092
tgtccatctgtaactgtccatctgtaactgtccattctgtaactggccattctgtaactgtccattctgtaactgtccatctgtaactgtccattctgtaactgtccattctgtaactgtccattctgtaactgtccatgtgtaactgtccatCTGTAACTGTCCATCTGTAACTGTCCATCTGTAACTGTCCATTCGGTAACCCTCCATTCTGTAACCGTCCatctgtaactgtccattctgtaactgtccatctgtaactggccattctgtaactgtccatctgtaactgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211092 True 294 lncRNA 0.43 1 41741514 41741807

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 474235 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 616136 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 769135 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 904013 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 1205787 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 281675 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 398262 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 981724 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1324480 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1557721 43299528 ~ 43420475 (+)
G1932959 NA non-coding upstream 1576 41739624 ~ 41739938 (+)
G1932952 NA non-coding upstream 8889 41732304 ~ 41732625 (+)
G1932939 NA non-coding upstream 22580 41718573 ~ 41718934 (+)
G1932926 NA non-coding upstream 37481 41703804 ~ 41704033 (+)
G1932918 NA non-coding upstream 45580 41695729 ~ 41695934 (+)
G1932963 NA non-coding downstream 290 41742097 ~ 41742353 (+)
G1932965 NA non-coding downstream 1034 41742841 ~ 41744467 (+)
G1932968 NA non-coding downstream 4851 41746658 ~ 41747006 (+)
G1932978 NA non-coding downstream 11599 41753406 ~ 41753614 (+)
G1932987 NA non-coding downstream 31144 41772951 ~ 41773155 (+)
G1932564 NA other upstream 403326 41330050 ~ 41338188 (+)
G1932319 NA other upstream 624102 41114637 ~ 41117412 (+)
G1931869 NA other upstream 1179608 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1635982 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1663182 40076476 ~ 40078332 (+)
G1933231 LOC106581444 other downstream 619449 42361256 ~ 42365260 (+)
G1933255 NA other downstream 647620 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 753773 42495580 ~ 42500990 (+)
G1933574 NA other downstream 789911 42531718 ~ 42534983 (+)

Expression


Co-expression Network