G1932968


Basic Information

Item Value
gene id G1932968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41746658 ~ 41747006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211100
tttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttttcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctggagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211100 True 349 lncRNA 0.44 1 41746658 41747006

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 479379 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 621280 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 774279 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 909157 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 1210931 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 276476 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 393063 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 976525 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1319281 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1552522 43299528 ~ 43420475 (+)
G1932965 NA non-coding upstream 2191 41742841 ~ 41744467 (+)
G1932963 NA non-coding upstream 4305 41742097 ~ 41742353 (+)
G1932961 NA non-coding upstream 4851 41741514 ~ 41741807 (+)
G1932959 NA non-coding upstream 6720 41739624 ~ 41739938 (+)
G1932952 NA non-coding upstream 14033 41732304 ~ 41732625 (+)
G1932978 NA non-coding downstream 6400 41753406 ~ 41753614 (+)
G1932987 NA non-coding downstream 25945 41772951 ~ 41773155 (+)
G1932991 NA non-coding downstream 33340 41780346 ~ 41995714 (+)
G1932993 NA non-coding downstream 39591 41786597 ~ 41786902 (+)
G1933021 NA non-coding downstream 95725 41842731 ~ 41843153 (+)
G1932564 NA other upstream 408470 41330050 ~ 41338188 (+)
G1932319 NA other upstream 629246 41114637 ~ 41117412 (+)
G1931869 NA other upstream 1184752 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1641126 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1668326 40076476 ~ 40078332 (+)
G1933231 LOC106581444 other downstream 614250 42361256 ~ 42365260 (+)
G1933255 NA other downstream 642421 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 748574 42495580 ~ 42500990 (+)
G1933574 NA other downstream 784712 42531718 ~ 42534983 (+)

Expression


Co-expression Network