G1932993


Basic Information

Item Value
gene id G1932993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41786597 ~ 41786902 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211131
CAGCTGTCGTGGTCAGCCTAGTTGTTGGAGGAGGTActtctctgtttcagctgtcgggggaagtctagctgtttggagaaggagGTActtctctgtttcagctgtcgggggaagtctagctgtttggagaaggaggtactAATCTGTTGCAGCTGTCGGGGGCAGTCTAGCTGTGTGGAGAaggaggtactgttctgtttcagctgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211131 True 208 lncRNA 0.52 2 41786597 41786902

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 519318 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 661219 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 814218 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 949096 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 1250870 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 236580 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 353167 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 936629 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1279385 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1512626 43299528 ~ 43420475 (+)
G1932987 NA non-coding upstream 13442 41772951 ~ 41773155 (+)
G1932978 NA non-coding upstream 32983 41753406 ~ 41753614 (+)
G1932968 NA non-coding upstream 39591 41746658 ~ 41747006 (+)
G1932965 NA non-coding upstream 42130 41742841 ~ 41744467 (+)
G1932963 NA non-coding upstream 44244 41742097 ~ 41742353 (+)
G1933021 NA non-coding downstream 55829 41842731 ~ 41843153 (+)
G1933066 NA non-coding downstream 142493 41929395 ~ 41929769 (+)
G1933067 NA non-coding downstream 193111 41980013 ~ 41984881 (+)
G1933093 NA non-coding downstream 203616 41990518 ~ 41991989 (+)
G1933096 NA non-coding downstream 210186 41997088 ~ 41997969 (+)
G1932564 NA other upstream 448409 41330050 ~ 41338188 (+)
G1932319 NA other upstream 669185 41114637 ~ 41117412 (+)
G1931869 NA other upstream 1224691 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1681065 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1708265 40076476 ~ 40078332 (+)
G1933231 LOC106581444 other downstream 574354 42361256 ~ 42365260 (+)
G1933255 NA other downstream 602525 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 708678 42495580 ~ 42500990 (+)
G1933574 NA other downstream 744816 42531718 ~ 42534983 (+)

Expression


Co-expression Network