G1933257


Basic Information

Item Value
gene id G1933257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42395382 ~ 42395594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211454
AGATAGGAGACACAGTTATAGAGACACAGTcagaaagagataggagacacgatcagaaagagataggagacacggtcagaaagagataggagacacggtcagaaagagataggagacacagttatagagacacagtcagaaagagataggagacacagttatagagacacggtcagaaagagataggagacacggttagaaagagataggaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211454 True 213 lncRNA 0.43 1 42395382 42395594

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 59912 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 316652 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1128103 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1270004 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1423003 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 327937 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 670693 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 903934 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 1044419 43440013 ~ 43465245 (+)
treh treh coding downstream 1077130 43472724 ~ 43491902 (+)
G1933253 NA non-coding upstream 7583 42387589 ~ 42387799 (+)
G1933252 NA non-coding upstream 8828 42386302 ~ 42386554 (+)
G1933248 NA non-coding upstream 15979 42379127 ~ 42379403 (+)
G1933242 NA non-coding upstream 23656 42371448 ~ 42371726 (+)
G1933232 LOC106613252 non-coding upstream 24923 42369816 ~ 42370459 (+)
G1933261 NA non-coding downstream 15739 42411333 ~ 42411534 (+)
G1933263 NA non-coding downstream 21071 42416665 ~ 42416866 (+)
G1933264 NA non-coding downstream 29831 42425425 ~ 42425660 (+)
G1933265 NA non-coding downstream 33393 42428987 ~ 42429312 (+)
G1933545 NA non-coding downstream 54733 42450327 ~ 42450742 (+)
G1933255 NA other upstream 5121 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 30122 42361256 ~ 42365260 (+)
G1932564 NA other upstream 1057194 41330050 ~ 41338188 (+)
G1932319 NA other upstream 1277970 41114637 ~ 41117412 (+)
G1933563 st14 other downstream 99986 42495580 ~ 42500990 (+)
G1933574 NA other downstream 136124 42531718 ~ 42534983 (+)
G1933999 NA other downstream 762509 43158103 ~ 43158566 (+)
G1934201 NA other downstream 1037854 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2704708 45100302 ~ 45103958 (+)

Expression


Co-expression Network