G1933261


Basic Information

Item Value
gene id G1933261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42411333 ~ 42411534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211458
gctgaaatgcagtggaaatgtttttgggtgattcagttcatttgcatggcaaagagggactttgcaattaattgcaattcatctgatcactcttcataacattctggagtatatgcaaattgccatcaaacaaactgaggcagcagactttgtgaaaattaatatttgtgtcattctcaaaacattcTCAAAACGGctgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211458 True 202 lncRNA 0.37 1 42411333 42411534

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 75863 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 332603 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1144054 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1285955 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1438954 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 311997 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 654753 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 887994 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 1028479 43440013 ~ 43465245 (+)
treh treh coding downstream 1061190 43472724 ~ 43491902 (+)
G1933257 NA non-coding upstream 15739 42395382 ~ 42395594 (+)
G1933253 NA non-coding upstream 23534 42387589 ~ 42387799 (+)
G1933252 NA non-coding upstream 24779 42386302 ~ 42386554 (+)
G1933248 NA non-coding upstream 31930 42379127 ~ 42379403 (+)
G1933242 NA non-coding upstream 39607 42371448 ~ 42371726 (+)
G1933263 NA non-coding downstream 5131 42416665 ~ 42416866 (+)
G1933264 NA non-coding downstream 13891 42425425 ~ 42425660 (+)
G1933265 NA non-coding downstream 17453 42428987 ~ 42429312 (+)
G1933545 NA non-coding downstream 38793 42450327 ~ 42450742 (+)
G1933547 NA non-coding downstream 39993 42451527 ~ 42451889 (+)
G1933255 NA other upstream 21072 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 46073 42361256 ~ 42365260 (+)
G1932564 NA other upstream 1073145 41330050 ~ 41338188 (+)
G1932319 NA other upstream 1293921 41114637 ~ 41117412 (+)
G1933563 st14 other downstream 84046 42495580 ~ 42500990 (+)
G1933574 NA other downstream 120184 42531718 ~ 42534983 (+)
G1933999 NA other downstream 746569 43158103 ~ 43158566 (+)
G1934201 NA other downstream 1021914 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2688768 45100302 ~ 45103958 (+)

Expression


Co-expression Network