G1933935


Basic Information

Item Value
gene id G1933935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43001623 ~ 43001872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212310
tggttgaagatatccctctagtggtgtgggggctgtgcttcggcaaagtgggtggggttatatccttcctgtttggccctgtccgggggtgtcctcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctggggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212310 True 250 lncRNA 0.54 1 43001623 43001872

Neighbor

gene id symbol gene type direction distance location
prdm10 prdm10 coding upstream 216463 42723531 ~ 42785160 (+)
LOC110503413 LOC106613251 coding upstream 666153 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 922893 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1734344 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1876245 41012678 ~ 41125378 (+)
cdon LOC106613390 coding downstream 64415 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 297656 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 438141 43440013 ~ 43465245 (+)
treh treh coding downstream 470852 43472724 ~ 43491902 (+)
G1933934 NA non-coding upstream 2545 42998878 ~ 42999078 (+)
G1933729 NA non-coding upstream 24886 42976434 ~ 42976737 (+)
G1933716 NA non-coding upstream 69674 42927060 ~ 42931949 (+)
G1933702 NA non-coding upstream 123903 42876894 ~ 42877720 (+)
G1933673 NA non-coding upstream 220555 42780771 ~ 42781068 (+)
G1933938 NA non-coding downstream 2322 43004194 ~ 43004629 (+)
G1933942 NA non-coding downstream 26928 43028800 ~ 43046299 (+)
G1933941 NA non-coding downstream 35031 43036903 ~ 43037533 (+)
G1933951 NA non-coding downstream 55359 43057231 ~ 43123215 (+)
G1933963 NA non-coding downstream 77347 43079219 ~ 43080288 (+)
G1933574 NA other upstream 466640 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 500633 42495580 ~ 42500990 (+)
G1933255 NA other upstream 611362 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 636363 42361256 ~ 42365260 (+)
G1933999 NA other downstream 156231 43158103 ~ 43158566 (+)
G1934201 NA other downstream 431576 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2098430 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2102260 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2286638 45288510 ~ 45289135 (+)

Expression


Co-expression Network