Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 43028800 ~ 43046299 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212319 | False | 277 | lncRNA | 0.47 | 3 | 43028800 | 43046299 |
| TU2212318 | True | 262 | lncRNA | 0.47 | 2 | 43031898 | 43032439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prdm10 | prdm10 | coding | upstream | 243640 | 42723531 ~ 42785160 (+) |
| LOC110503413 | LOC106613251 | coding | upstream | 693330 | 42140069 ~ 42335470 (+) |
| LOC110512028 | neus | coding | upstream | 950070 | 42023482 ~ 42078730 (+) |
| LOC118944044 | NA | coding | upstream | 1761521 | 41266767 ~ 41267279 (+) |
| si | LOC106613210 | coding | upstream | 1903422 | 41012678 ~ 41125378 (+) |
| cdon | LOC106613390 | coding | downstream | 19988 | 43066287 ~ 43212712 (+) |
| bcl9l | LOC106613392 | coding | downstream | 253229 | 43299528 ~ 43420475 (+) |
| ddx6 | ddx6 | coding | downstream | 393714 | 43440013 ~ 43465245 (+) |
| treh | treh | coding | downstream | 426425 | 43472724 ~ 43491902 (+) |
| G1933938 | NA | non-coding | upstream | 24171 | 43004194 ~ 43004629 (+) |
| G1933935 | NA | non-coding | upstream | 26928 | 43001623 ~ 43001872 (+) |
| G1933934 | NA | non-coding | upstream | 29722 | 42998878 ~ 42999078 (+) |
| G1933729 | NA | non-coding | upstream | 52063 | 42976434 ~ 42976737 (+) |
| G1933716 | NA | non-coding | upstream | 96851 | 42927060 ~ 42931949 (+) |
| G1933951 | NA | non-coding | downstream | 10932 | 43057231 ~ 43123215 (+) |
| G1933963 | NA | non-coding | downstream | 32920 | 43079219 ~ 43080288 (+) |
| G1933973 | NA | non-coding | downstream | 88536 | 43134835 ~ 43170632 (+) |
| G1933974 | NA | non-coding | downstream | 101675 | 43147974 ~ 43148379 (+) |
| G1934010 | NA | non-coding | downstream | 142742 | 43189041 ~ 43199824 (+) |
| G1933574 | NA | other | upstream | 493817 | 42531718 ~ 42534983 (+) |
| G1933563 | st14 | other | upstream | 527810 | 42495580 ~ 42500990 (+) |
| G1933255 | NA | other | upstream | 638539 | 42389427 ~ 42390261 (+) |
| G1933231 | LOC106581444 | other | upstream | 663540 | 42361256 ~ 42365260 (+) |
| G1933999 | NA | other | downstream | 111804 | 43158103 ~ 43158566 (+) |
| G1934201 | NA | other | downstream | 387149 | 43433448 ~ 43435352 (+) |
| G1935694 | NA | other | downstream | 2054003 | 45100302 ~ 45103958 (+) |
| G1935696 | NA | other | downstream | 2057833 | 45104132 ~ 45104500 (+) |
| G1935897 | NA | other | downstream | 2242211 | 45288510 ~ 45289135 (+) |
