G1934136


Basic Information

Item Value
gene id G1934136
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43263882 ~ 43264084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212557
gtatctgtatctgtagtgtctgtatctgtaatgtctgtatctgtatctgtagtgtctgtatctgtagtgtctgtatctgtatctgtagtatctgtatctgtatctgtagtgtctgtatctgtagtatctgtagtatctgtatctgtagtgtctatatctgtagtaTCTGGATCTGtaatgtctgtatctgtagtatctgtatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212557 True 203 lncRNA 0.36 1 43263882 43264084

Neighbor

gene id symbol gene type direction distance location
cdon LOC106613390 coding upstream 51170 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 478722 42723531 ~ 42785160 (+)
LOC110503413 LOC106613251 coding upstream 928412 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 1185152 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1996603 41266767 ~ 41267279 (+)
bcl9l LOC106613392 coding downstream 35444 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 175929 43440013 ~ 43465245 (+)
treh treh coding downstream 208640 43472724 ~ 43491902 (+)
G1934027 NA non-coding upstream 43582 43219756 ~ 43220300 (+)
G1934019 NA non-coding upstream 54787 43208789 ~ 43209095 (+)
G1934018 NA non-coding upstream 55555 43206401 ~ 43208327 (+)
G1934017 NA non-coding upstream 56137 43206121 ~ 43207745 (+)
G1934010 NA non-coding upstream 64058 43189041 ~ 43199824 (+)
G1934142 NA non-coding downstream 41912 43305996 ~ 43306676 (+)
G1934152 NA non-coding downstream 59263 43323347 ~ 43323973 (+)
G1934192 NA non-coding downstream 144959 43409043 ~ 43409310 (+)
G1934198 NA non-coding downstream 154560 43418644 ~ 43468153 (+)
G1934203 NA non-coding downstream 159696 43423780 ~ 43430519 (+)
G1933999 NA other upstream 105316 43158103 ~ 43158566 (+)
G1933574 NA other upstream 728899 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 762892 42495580 ~ 42500990 (+)
G1933255 NA other upstream 873621 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 898622 42361256 ~ 42365260 (+)
G1934201 NA other downstream 169364 43433448 ~ 43435352 (+)
G1935694 NA other downstream 1836218 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1840048 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2024426 45288510 ~ 45289135 (+)
G1936028 NA other downstream 2221259 45485343 ~ 45492999 (+)

Expression


Co-expression Network