G1934210


Basic Information

Item Value
gene id G1934210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43443281 ~ 43445105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212673
TGTTACAGCCCTTGTTCACGGAAGTCGTGGCGACCACCTATattaattagctatctagcaagCCCCTAACACCTGTGTAAGCGTAACTCGAAGTGTGACGGaatgtagtttagtaggatggaggctccatagctgtatgggtctgtaactgctacagtgtagtttagtaggatggaggctgtatggatctgtaactactacagtgtagtttagtaggatggaggctgtatggatctgtaactactacagtgtagtttagtaggatggaggctgtatggatctgtaactgctacagtgtagtttagtaggatggaggctgtatggatctgtaactactacagtgtagtttagtaggatggaggctgtatggatctgtatctactacagtgtagtttagtaggatggaggctgtatggatctgtaactgctacagtgtagtttagtaggatggagactccatagctgtatgggtctgtaactgctacagtttagtaggatggaggctgtatggatctgtaactgctacagtgtagtttagtaggatggaggctgtatggatctgtaactactacagtgtagtttagtaggatggaggctgtatggatctgtaactactacagtgtagtttagtaggatggaggctgtatgggtctgtaactgctacagtgtagtttagtaggatggaggctgtatggatctgtaactactacagtgtagtttataGCCTGTTGTCCTACTCCAACCTGACTTGCGTCTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212673 True 760 lncRNA 0.44 2 43443281 43445105

Neighbor

gene id symbol gene type direction distance location
bcl9l LOC106613392 coding upstream 22806 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 230569 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 658121 42723531 ~ 42785160 (+)
LOC110503413 LOC106613251 coding upstream 1107811 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 1364551 42023482 ~ 42078730 (+)
treh treh coding downstream 27619 43472724 ~ 43491902 (+)
G1934203 NA non-coding upstream 12762 43423780 ~ 43430519 (+)
G1934192 NA non-coding upstream 33971 43409043 ~ 43409310 (+)
G1934152 NA non-coding upstream 119308 43323347 ~ 43323973 (+)
G1934142 NA non-coding upstream 136605 43305996 ~ 43306676 (+)
G1934136 NA non-coding upstream 179197 43263882 ~ 43264084 (+)
G1934215 NA non-coding downstream 8567 43453672 ~ 43457714 (+)
G1934195 NA non-coding downstream 24418 43469523 ~ 43471503 (+)
G1934242 NA non-coding downstream 131570 43576675 ~ 43579791 (+)
G1934245 NA non-coding downstream 141636 43586741 ~ 43587197 (+)
G1934400 NA non-coding downstream 169923 43615028 ~ 43615230 (+)
G1934201 NA other upstream 7929 43433448 ~ 43435352 (+)
G1933999 NA other upstream 284715 43158103 ~ 43158566 (+)
G1933574 NA other upstream 908298 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 942291 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1053020 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1655197 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1659027 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1843405 45288510 ~ 45289135 (+)
G1936028 NA other downstream 2040238 45485343 ~ 45492999 (+)
G1936029 NA other downstream 2040631 45485736 ~ 45487871 (+)

Expression


Co-expression Network