G1934242


Basic Information

Item Value
gene id G1934242
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43576675 ~ 43579791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212715
tttaaaagtgtcctgTACAATAAGGAGATCTACTGTTCCTATGTTATGTAGGAAAAAGTCCGTTATAAATTATTCTGTCCCAGTTAAAAACAAGTTTTCATTgaataggctttgattaaattccCAGTATCATCACCCTCGTGGAAATTCAGTAAGAGTAATGTATGTGCCAATTATGTGATGGTCCGACCTCATTCTGTCCCCtgtcaacactttttaaactgttggtgccagagagaatgacataagaaagaagtcaagacgactagcttgattgagcctcctccatgtatatctcactaggtcaggatattaaacctccaccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggagattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcccTAGGGCAGGGTttttaagcctccatatatccactaattccaatatatcatGATTTCCTTTAATAGCCTGATGTTGATAGTTTGTAGTGTAATTTCCTTTTTACGGTCCCTTGAGGTATTTAAAACTGTATTA
>TU2212721
tttaaaagtgtcctgTACAATAAGGAGATCTACTGTTCCTATGTTATGTAGGAAAAAGTCCGTTATAAATTATTCTGTCCCAGTTAAAAACAAGTTTTCATTgaataggctttgattaaattccCAGTATCATCACCCTCGTGGAAATTCAGTAAGAGTAATGTATGTGCCAATTATGTGATGGTCCGACCTCATTCTGTCCCCtgtcaacactttttaaactgttggtgccagagagaatgacataagaaagaagtcaagacgactagcttgattgagcctcctccatgtatatctcactaggtcaggatattaaacctccaccatgtatatctcactaggtcaggatattaaacctcctctatgtatatctcactaggtcaggatattaaacctccatgtatatctcactacgtcaggagattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctccatgtatatctcactaggtcaggatattaaacctccatgtatatctcactaggtcaggagattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggagattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcactaggtcaggatattaaacctcctccatgtatatctcccTAGGGCAGGGTttttaagcctccatatatccactaattccaatatatcatGATTTCCTTTAATAGCCTGATGTTGATAGTTTGTAGTGTAATTTCCTTTTTACGGTCCCTTGAGGTATTTAAAACTGTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212715 False 660 lncRNA 0.38 2 43576675 43579791
TU2212721 True 917 lncRNA 0.38 4 43576675 43579791

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 84773 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 111430 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 156200 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 363963 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 791515 42723531 ~ 42785160 (+)
G1934195 NA non-coding upstream 105172 43469523 ~ 43471503 (+)
G1934198 NA non-coding upstream 108522 43418644 ~ 43468153 (+)
G1934215 NA non-coding upstream 118961 43453672 ~ 43457714 (+)
G1934210 NA non-coding upstream 131570 43443281 ~ 43445105 (+)
G1934203 NA non-coding upstream 146156 43423780 ~ 43430519 (+)
G1934245 NA non-coding downstream 6950 43586741 ~ 43587197 (+)
G1934400 NA non-coding downstream 35237 43615028 ~ 43615230 (+)
G1934407 NA non-coding downstream 60418 43640209 ~ 43642077 (+)
G1934413 NA non-coding downstream 81287 43661078 ~ 43662273 (+)
G1934437 NA non-coding downstream 87510 43667301 ~ 43667518 (+)
G1934201 NA other upstream 141323 43433448 ~ 43435352 (+)
G1933999 NA other upstream 418109 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1041692 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1075685 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1186414 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1520511 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1524341 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1708719 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1905552 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1905945 45485736 ~ 45487871 (+)

Expression


Co-expression Network