G1934400


Basic Information

Item Value
gene id G1934400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43615028 ~ 43615230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212938
ttctgacatcagctgatatatcaatgtgctgtatagaaacccagcctaaaaccccaatcagcaagcaatgcaggtgtagaagcacagtggctaggaaaaactccctagaaaggccaaaacctaggacgaaacctagagagagaggaaccagactatgaggggtggccagttctcttctggctgtgccgggtggagattataac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212938 True 203 lncRNA 0.48 1 43615028 43615230

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 123126 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 149783 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 194553 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 402316 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 829868 42723531 ~ 42785160 (+)
G1934245 NA non-coding upstream 27831 43586741 ~ 43587197 (+)
G1934242 NA non-coding upstream 35237 43576675 ~ 43579791 (+)
G1934195 NA non-coding upstream 143525 43469523 ~ 43471503 (+)
G1934215 NA non-coding upstream 157314 43453672 ~ 43457714 (+)
G1934210 NA non-coding upstream 169923 43443281 ~ 43445105 (+)
G1934407 NA non-coding downstream 24979 43640209 ~ 43642077 (+)
G1934413 NA non-coding downstream 45848 43661078 ~ 43662273 (+)
G1934437 NA non-coding downstream 52071 43667301 ~ 43667518 (+)
G1934448 NA non-coding downstream 61214 43676444 ~ 43677127 (+)
G1934463 NA non-coding downstream 82549 43697779 ~ 43698417 (+)
G1934201 NA other upstream 179676 43433448 ~ 43435352 (+)
G1933999 NA other upstream 456462 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1080045 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1114038 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1224767 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1485072 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1488902 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1673280 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1870113 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1870506 45485736 ~ 45487871 (+)

Expression


Co-expression Network