G1934437


Basic Information

Item Value
gene id G1934437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43667301 ~ 43667518 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212982
cagcccagctaacagaggaacacacagcccagctaacagaggaacacaaagcccagctaacagaggaccagccaagttaacagaggaccacacagcccagctaacagaggaaaacacacagcccagctaacagatgtccacacagcccagctaacagatgtccacacagcccagctaacagaggaacacacagcccagctaacagaggaccacacagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212982 True 218 lncRNA 0.54 1 43667301 43667518

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 175399 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 202056 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 246826 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 454589 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 882141 42723531 ~ 42785160 (+)
G1934413 NA non-coding upstream 5028 43661078 ~ 43662273 (+)
G1934407 NA non-coding upstream 25224 43640209 ~ 43642077 (+)
G1934400 NA non-coding upstream 52071 43615028 ~ 43615230 (+)
G1934245 NA non-coding upstream 80104 43586741 ~ 43587197 (+)
G1934242 NA non-coding upstream 87510 43576675 ~ 43579791 (+)
G1934448 NA non-coding downstream 8926 43676444 ~ 43677127 (+)
G1934463 NA non-coding downstream 30261 43697779 ~ 43698417 (+)
G1934519 NA non-coding downstream 62702 43730220 ~ 43730438 (+)
G1934521 NA non-coding downstream 63663 43731181 ~ 43731418 (+)
G1934551 NA non-coding downstream 125685 43793203 ~ 43795482 (+)
G1934201 NA other upstream 231949 43433448 ~ 43435352 (+)
G1933999 NA other upstream 508735 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1132318 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1166311 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1277040 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1432784 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1436614 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1620992 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1817825 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1818218 45485736 ~ 45487871 (+)

Expression


Co-expression Network