G1934551


Basic Information

Item Value
gene id G1934551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 43793203 ~ 43795482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213123
gttctatataagagaggtaagggaccagctacactattcacagccctgtgtaatgttctatataagagaggtaagggaccagctacactattcacagccctgtgtaatgttatatataagagaggtaagggaccagctacactattcacagccctgtgtaatgttctatataagagaggtaagggaccagctacactattcacagccctgtgtaatgttctatataagagaggtaagggaccagctacactattcacagccctgtgtagtgttctatataagagaggtaagggaccagctacactattcacagccctgtgtagtgttctatataagagaggtaagggaccagctacactattcacagccctgtgtagtgttctatataagagaggtaagggaccagctacactattcacagccctgtgtaatgttctatataag

Function

NR:

description
PREDICTED: agglutinin-like protein 5 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213123 True 444 lncRNA 0.43 3 43793203 43795482

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 301301 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 327958 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 372728 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 580491 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 1008043 42723531 ~ 42785160 (+)
G1934521 NA non-coding upstream 61785 43731181 ~ 43731418 (+)
G1934519 NA non-coding upstream 62765 43730220 ~ 43730438 (+)
G1934463 NA non-coding upstream 94786 43697779 ~ 43698417 (+)
G1934448 NA non-coding upstream 116076 43676444 ~ 43677127 (+)
G1934437 NA non-coding upstream 125685 43667301 ~ 43667518 (+)
G1934612 NA non-coding downstream 32107 43827589 ~ 43828335 (+)
G1934614 NA non-coding downstream 35648 43831130 ~ 43831432 (+)
G1934618 NA non-coding downstream 45346 43840828 ~ 43841077 (+)
G1934628 NA non-coding downstream 60282 43855764 ~ 43855983 (+)
G1934658 NA non-coding downstream 186119 43981601 ~ 43981820 (+)
G1934201 NA other upstream 357851 43433448 ~ 43435352 (+)
G1933999 NA other upstream 634637 43158103 ~ 43158566 (+)
G1933574 NA other upstream 1258220 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 1292213 42495580 ~ 42500990 (+)
G1933255 NA other upstream 1402942 42389427 ~ 42390261 (+)
G1935694 NA other downstream 1304820 45100302 ~ 45103958 (+)
G1935696 NA other downstream 1308650 45104132 ~ 45104500 (+)
G1935897 NA other downstream 1493028 45288510 ~ 45289135 (+)
G1936028 NA other downstream 1689861 45485343 ~ 45492999 (+)
G1936029 NA other downstream 1690254 45485736 ~ 45487871 (+)

Expression


Co-expression Network