G1935231


Basic Information

Item Value
gene id G1935231
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44980049 ~ 44980270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213936
ccttatgattaacgagacgtggtgtgatcataacaacatacaggaactcaagtccttttgttcacctgatttagaattcctcacaatcaaattccgaccacattatctaccaagagaattctcttcgatcataatcacagtcatgtatatcccccccaagcagacacatcgacggctcTGAAAGAACTTCagtggactctatgtaaactggaaaccacatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213936 True 222 lncRNA 0.41 1 44980049 44980270

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1488147 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1514804 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1559574 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1767337 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2194889 42723531 ~ 42785160 (+)
G1935220 NA non-coding upstream 30961 44948450 ~ 44949088 (+)
G1935219 NA non-coding upstream 32864 44946329 ~ 44947185 (+)
G1935158 NA non-coding upstream 163549 44816162 ~ 44816500 (+)
G1935099 NA non-coding upstream 283961 44687435 ~ 44696088 (+)
G1935101 NA non-coding upstream 285465 44691447 ~ 44694584 (+)
G1935233 NA non-coding downstream 6776 44987046 ~ 44987248 (+)
G1935238 NA non-coding downstream 14008 44994278 ~ 45041868 (+)
G1935243 NA non-coding downstream 23645 45003915 ~ 45008217 (+)
G1935241 NA non-coding downstream 28746 45009016 ~ 45030884 (+)
G1935261 NA non-coding downstream 62214 45042484 ~ 45042832 (+)
G1934201 NA other upstream 1544697 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1821483 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2445066 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2479059 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2589788 42389427 ~ 42390261 (+)
G1935694 NA other downstream 120032 45100302 ~ 45103958 (+)
G1935696 NA other downstream 123862 45104132 ~ 45104500 (+)
G1935897 NA other downstream 308240 45288510 ~ 45289135 (+)
G1936028 NA other downstream 505073 45485343 ~ 45492999 (+)
G1936029 NA other downstream 505466 45485736 ~ 45487871 (+)

Expression


Co-expression Network