G1935233


Basic Information

Item Value
gene id G1935233
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 44987046 ~ 44987248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213938
gctggatgaggagactgaggcttcagtgtgctaGTAGagcaggttagtgaactcagccccaggaccagctggatgaggagactgaggcttcagtgtgttagtagaacaggttagtgaactcagccccaggaccagctggatgaggggactgaggcttcagtgtgttagtagaacaggttagtgaactcagccccaggaccagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213938 True 203 lncRNA 0.54 1 44987046 44987248

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1495144 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1521801 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1566571 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1774334 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2201886 42723531 ~ 42785160 (+)
G1935231 NA non-coding upstream 6776 44980049 ~ 44980270 (+)
G1935220 NA non-coding upstream 37958 44948450 ~ 44949088 (+)
G1935219 NA non-coding upstream 39861 44946329 ~ 44947185 (+)
G1935158 NA non-coding upstream 170546 44816162 ~ 44816500 (+)
G1935099 NA non-coding upstream 290958 44687435 ~ 44696088 (+)
G1935238 NA non-coding downstream 7030 44994278 ~ 45041868 (+)
G1935243 NA non-coding downstream 16667 45003915 ~ 45008217 (+)
G1935241 NA non-coding downstream 21768 45009016 ~ 45030884 (+)
G1935261 NA non-coding downstream 55236 45042484 ~ 45042832 (+)
G1935266 NA non-coding downstream 58878 45046126 ~ 45049464 (+)
G1934201 NA other upstream 1551694 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1828480 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2452063 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2486056 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2596785 42389427 ~ 42390261 (+)
G1935694 NA other downstream 113054 45100302 ~ 45103958 (+)
G1935696 NA other downstream 116884 45104132 ~ 45104500 (+)
G1935897 NA other downstream 301262 45288510 ~ 45289135 (+)
G1936028 NA other downstream 498095 45485343 ~ 45492999 (+)
G1936029 NA other downstream 498488 45485736 ~ 45487871 (+)

Expression


Co-expression Network