G1935243


Basic Information

Item Value
gene id G1935243
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45003915 ~ 45008217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2213967
tagtttagtttcttatagagctcctggtcagtaatagtttagtttcttatagatctcctggtcagtaatagtttagtttcttatagagctcctggtcagtaatagtttagtttctgatagagttcctggacagtaatagtttagtttcttatagagctcctggtcagtaatagtttagtttctcatagagctcctggtcagtaatagtttagtttcttatagagctcctggtcagtaatagtttagtttcttatagagctcctggtcagtaatagtttagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2213967 True 282 lncRNA 0.35 2 45003915 45008217

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1512013 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1538670 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1583440 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 1791203 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2218755 42723531 ~ 42785160 (+)
G1935233 NA non-coding upstream 16667 44987046 ~ 44987248 (+)
G1935231 NA non-coding upstream 23645 44980049 ~ 44980270 (+)
G1935220 NA non-coding upstream 54827 44948450 ~ 44949088 (+)
G1935219 NA non-coding upstream 56730 44946329 ~ 44947185 (+)
G1935158 NA non-coding upstream 187415 44816162 ~ 44816500 (+)
G1935241 NA non-coding downstream 799 45009016 ~ 45030884 (+)
G1935261 NA non-coding downstream 34267 45042484 ~ 45042832 (+)
G1935266 NA non-coding downstream 37909 45046126 ~ 45049464 (+)
G1935264 NA non-coding downstream 43835 45052052 ~ 45054241 (+)
G1935675 NA non-coding downstream 66408 45074625 ~ 45075553 (+)
G1934201 NA other upstream 1568563 43433448 ~ 43435352 (+)
G1933999 NA other upstream 1845349 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2468932 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 2502925 42495580 ~ 42500990 (+)
G1933255 NA other upstream 2613654 42389427 ~ 42390261 (+)
G1935694 NA other downstream 92085 45100302 ~ 45103958 (+)
G1935696 NA other downstream 95915 45104132 ~ 45104500 (+)
G1935897 NA other downstream 280293 45288510 ~ 45289135 (+)
G1936028 NA other downstream 477126 45485343 ~ 45492999 (+)
G1936029 NA other downstream 477519 45485736 ~ 45487871 (+)

Expression


Co-expression Network