G1935852


Basic Information

Item Value
gene id G1935852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45248345 ~ 45248572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214735
GGGATTCCGCTAGCGACAACATCTGTTGAAaaggcagagcgcgaaattcaaaaatacgttttagaaatatttaactttcatacattcacaagtgcaatataccaaattaaagcttaatttcgtgttaatctacccatcgtgtccgatttcaaaaaggcttcacagcgaaagcacaccatgtgattatgttAGTTCAGAGCTtagtcacaaaaacacatacagccatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214735 True 228 lncRNA 0.37 1 45248345 45248572

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1756443 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1783100 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1827870 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 2035633 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2463185 42723531 ~ 42785160 (+)
G1935803 NA non-coding upstream 36888 45211157 ~ 45211457 (+)
G1935801 NA non-coding upstream 41096 45206795 ~ 45207249 (+)
G1935795 NA non-coding upstream 48363 45198448 ~ 45199982 (+)
G1935750 NA non-coding upstream 51821 45196061 ~ 45196524 (+)
G1935723 NA non-coding upstream 103946 45140330 ~ 45144399 (+)
G1935858 NA non-coding downstream 5262 45253834 ~ 45254359 (+)
G1935875 NA non-coding downstream 22705 45271277 ~ 45272793 (+)
G1935889 NA non-coding downstream 34201 45282773 ~ 45283005 (+)
G1935893 NA non-coding downstream 36788 45285360 ~ 45285581 (+)
G1935896 NA non-coding downstream 39021 45287593 ~ 45287924 (+)
G1935696 NA other upstream 143845 45104132 ~ 45104500 (+)
G1935694 NA other upstream 144387 45100302 ~ 45103958 (+)
G1934201 NA other upstream 1812993 43433448 ~ 43435352 (+)
G1933999 NA other upstream 2089779 43158103 ~ 43158566 (+)
G1933574 NA other upstream 2713362 42531718 ~ 42534983 (+)
G1935897 NA other downstream 39938 45288510 ~ 45289135 (+)
G1936028 NA other downstream 236771 45485343 ~ 45492999 (+)
G1936029 NA other downstream 237164 45485736 ~ 45487871 (+)
G1936247 NA other downstream 517278 45765850 ~ 45767859 (+)
G1936286 NA other downstream 596132 45844704 ~ 45846538 (+)

Expression


Co-expression Network