G1935971



Basic Information


Item Value
gene id G1935971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45387172 ~ 45387385 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2214889
CTCATAAGCACCGCTACacgaaaggaagacccagagttacccatgctgcagaggatacgttcattagagttaactggctctcataagcaccgccacaggaaaggaagacccagagttacccatgctgcagaggatacgttcattagagttaactggctctcataagcaccgccacaggaaaggaacacccagagttacccatgctgcagaggat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2214889 True 214 lncRNA 0.50 1 45387172 45387385

Neighbor


gene id symbol gene type direction distance location
treh treh coding upstream 1895270 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1921927 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 1966697 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 2174460 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2602012 42723531 ~ 42785160 (+)
G1935899 NA non-coding upstream 88189 45296610 ~ 45298983 (+)
G1935896 NA non-coding upstream 99248 45287593 ~ 45287924 (+)
G1935893 NA non-coding upstream 101591 45285360 ~ 45285581 (+)
G1935889 NA non-coding upstream 104167 45282773 ~ 45283005 (+)
G1935875 NA non-coding upstream 114379 45271277 ~ 45272793 (+)
G1935977 NA non-coding downstream 8577 45395962 ~ 45397684 (+)
G1935979 NA non-coding downstream 12860 45400245 ~ 45400652 (+)
G1936005 NA non-coding downstream 52412 45439797 ~ 45443315 (+)
G1936028 NA non-coding downstream 97958 45485343 ~ 45492999 (+)
G1936075 NA non-coding downstream 115390 45502775 ~ 45503007 (+)
G1935897 NA other upstream 98037 45288510 ~ 45289135 (+)
G1935696 NA other upstream 282672 45104132 ~ 45104500 (+)
G1935694 NA other upstream 283214 45100302 ~ 45103958 (+)
G1934201 NA other upstream 1951820 43433448 ~ 43435352 (+)
G1933999 NA other upstream 2228606 43158103 ~ 43158566 (+)
G1936029 NA other downstream 98351 45485736 ~ 45487871 (+)
G1936247 NA other downstream 378465 45765850 ~ 45767859 (+)
G1936286 NA other downstream 457319 45844704 ~ 45846538 (+)

Expression



Co-expression Network