G1936005


Basic Information

Item Value
gene id G1936005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45439797 ~ 45443315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2214933
tacagaatatccccgtccatgtgtatttcatcactacagaatatcccagtccatgtgtatttcatcactgacatcattacagaatatcccagtccatgtgtatttcatcactgacatcattacagaatatcccagtccatgtgtatttcatcactacagaatatcccagtccatgtgcatttcatcactgacatcactacagaatatcccagtccatgtgtatttcatcactacagaatatcccagtccatgtgtatttcatcactgacatcattacagaatatcccgGTCCATGTGtctttcatcactacagaatatcccagtccatgtgtatttcatcccTACAGAAagtcccagtccatgtgtatttgtGAGGGGTATTCCTTAGAATAATGTCCAATAGAGTTGATTTGTTAGGATTCGGTCTTGCAAGTGCATTAATTTATTGAGTGAGATTCAGAGAGTCACACAGTTCTTTAAAAGAGTCCGATACAGACGTAAGCATGTCCCTATTCAAATCTCCTAAAATAATGAATTCAGAGTCATTTAGCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC109204916

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2214933 True 552 lncRNA 0.38 2 45439797 45443315

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 1947895 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 1974552 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 2019322 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 2227085 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2654637 42723531 ~ 42785160 (+)
G1935979 NA non-coding upstream 39145 45400245 ~ 45400652 (+)
G1935977 NA non-coding upstream 42113 45395962 ~ 45397684 (+)
G1935971 NA non-coding upstream 52412 45387172 ~ 45387385 (+)
G1935899 NA non-coding upstream 140814 45296610 ~ 45298983 (+)
G1935896 NA non-coding upstream 151873 45287593 ~ 45287924 (+)
G1936028 NA non-coding downstream 42028 45485343 ~ 45492999 (+)
G1936075 NA non-coding downstream 59460 45502775 ~ 45503007 (+)
G1936086 NA non-coding downstream 70626 45513941 ~ 45514543 (+)
G1936089 NA non-coding downstream 73360 45516675 ~ 45516911 (+)
G1936090 NA non-coding downstream 73698 45517013 ~ 45517221 (+)
G1935897 NA other upstream 150662 45288510 ~ 45289135 (+)
G1935696 NA other upstream 335297 45104132 ~ 45104500 (+)
G1935694 NA other upstream 335839 45100302 ~ 45103958 (+)
G1934201 NA other upstream 2004445 43433448 ~ 43435352 (+)
G1933999 NA other upstream 2281231 43158103 ~ 43158566 (+)
G1936029 NA other downstream 42421 45485736 ~ 45487871 (+)
G1936247 NA other downstream 322535 45765850 ~ 45767859 (+)
G1936286 NA other downstream 401389 45844704 ~ 45846538 (+)

Expression


Co-expression Network