G1936127


Basic Information

Item Value
gene id G1936127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45549803 ~ 45550059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2215073
tgaaaaagctctgtgacacggcagggtcgactcattcagactgctcttactccctaatttttcagaatacaagcctgaaacaatttccaaagactgttgacatctagtggaagccataggaactggaatttgagtcctaagtcaatggatactgtaatggcattgaatagaaaaccaccaaaaaaaaaaaacctacttcctgaatggatttttctgaagttttcgcctgctaaatcagttctgttatactcaaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2215073 True 257 lncRNA 0.38 1 45549803 45550059

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 2057901 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 2084558 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 2129328 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 2337091 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2764643 42723531 ~ 42785160 (+)
G1936098 NA non-coding upstream 26849 45522664 ~ 45522954 (+)
G1936090 NA non-coding upstream 32582 45517013 ~ 45517221 (+)
G1936089 NA non-coding upstream 32892 45516675 ~ 45516911 (+)
G1936086 NA non-coding upstream 35260 45513941 ~ 45514543 (+)
G1936075 NA non-coding upstream 46796 45502775 ~ 45503007 (+)
G1936135 NA non-coding downstream 7196 45557255 ~ 45557564 (+)
G1936145 NA non-coding downstream 19313 45569372 ~ 45584931 (+)
G1936160 cntn5 non-coding downstream 43859 45593918 ~ 45594415 (+)
G1936161 NA non-coding downstream 44611 45594670 ~ 45595093 (+)
G1936162 NA non-coding downstream 45063 45595122 ~ 45595339 (+)
G1936028 NA other upstream 60928 45485343 ~ 45492999 (+)
G1936029 NA other upstream 61932 45485736 ~ 45487871 (+)
G1935897 NA other upstream 260668 45288510 ~ 45289135 (+)
G1935696 NA other upstream 445303 45104132 ~ 45104500 (+)
G1935694 NA other upstream 445845 45100302 ~ 45103958 (+)
G1936247 NA other downstream 215791 45765850 ~ 45767859 (+)
G1936286 NA other downstream 294645 45844704 ~ 45846538 (+)

Expression


Co-expression Network