G1936161


Basic Information

Item Value
gene id G1936161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45594670 ~ 45595093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2215107
TCACCTTGTACCTACATCACCTTGTACCTACATCACCTTGTAACTACATCACCTTGTGCCTAGAGCACCTTGTAACTACATCACCTTGTAACTACATCACCTTGTAACTACAGCACCTTGTGCCTAGATCACCTTGTATCTACAGCACCTTGTACCTACTTCACCTTGTTCCTACTTCACCTTGTACCTAGATCACCTTGTGCCTAGATCACCTTGTAACTACATCACATTGTACCTAGAGCACCTTGTGCCTAGATCACCTTGTACCTACATCACCTTGTACCTGGACCACCCATAGCACATTGTACCTAGACAACCTAGAGCACATTGTACCTAGAACACATTGTACCTAGAGCACATTGTACCTAGACAACCTAGAGCACCTTGTACTTAGAGCACCTTGAACCTAGAGCACCTAGAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2215107 True 424 lncRNA 0.45 1 45594670 45595093

Neighbor

gene id symbol gene type direction distance location
treh treh coding upstream 2102768 43472724 ~ 43491902 (+)
ddx6 ddx6 coding upstream 2129425 43440013 ~ 43465245 (+)
bcl9l LOC106613392 coding upstream 2174195 43299528 ~ 43420475 (+)
cdon LOC106613390 coding upstream 2381958 43066287 ~ 43212712 (+)
prdm10 prdm10 coding upstream 2809510 42723531 ~ 42785160 (+)
G1936160 cntn5 non-coding upstream 255 45593918 ~ 45594415 (+)
G1936145 NA non-coding upstream 9739 45569372 ~ 45584931 (+)
G1936135 NA non-coding upstream 37106 45557255 ~ 45557564 (+)
G1936127 NA non-coding upstream 44611 45549803 ~ 45550059 (+)
G1936098 NA non-coding upstream 71716 45522664 ~ 45522954 (+)
G1936162 NA non-coding downstream 29 45595122 ~ 45595339 (+)
G1936164 NA non-coding downstream 1483 45596576 ~ 45596783 (+)
G1936167 NA non-coding downstream 11781 45606874 ~ 45607105 (+)
G1936202 NA non-coding downstream 69245 45664338 ~ 45690334 (+)
G1936209 NA non-coding downstream 84546 45679639 ~ 45679934 (+)
G1936028 NA other upstream 105795 45485343 ~ 45492999 (+)
G1936029 NA other upstream 106799 45485736 ~ 45487871 (+)
G1935897 NA other upstream 305535 45288510 ~ 45289135 (+)
G1935696 NA other upstream 490170 45104132 ~ 45104500 (+)
G1935694 NA other upstream 490712 45100302 ~ 45103958 (+)
G1936247 NA other downstream 170757 45765850 ~ 45767859 (+)
G1936286 NA other downstream 249611 45844704 ~ 45846538 (+)

Expression


Co-expression Network