XLOC_038759 (dusp27)


Basic Information

Item Value
gene id XLOC_038759
gene name dusp27
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NW_018394426.1
NCBI id KZ116034.1
chromosome length 33615
location 1250 ~ 8270 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00076247
actctctcagaGCGACAAGACGGAGCCGCAGATGAGCAGtGATGGCGTCGTCTGTGGAGGATCAGCAGCTCCAGCAGGAGGAAGCAGAGAGTGTTAAAGATGTGCAGTCACATTACCTGCGCTGTCCTTCACCcagtttctCCATGATGTCAGACCGTTTCTCCACGGTGTCGGACCGGTTCTCTGTCATCTCGGGTTCTGAAGCTGAAAGCATCTTCATGGAGCCCATTCACCTGTCGTCCACCATCGCTGCCAAGAAGATCATcagtgaagagCTGCCGCCCAGACCCGCTCGCGTCTCCTCACCCCCGGACAGCGCTCTGGAGCCGGCGCAGCAGCTGATGGTGGAGGATCTGTACTCCAGGGTGCAGGAGCTGCTGGACGAGCGCAGCCTCTATAACACACCCTGCGTGCTGGACATCCAGAGGGCGCTGCTGCGAGACCGGCTGGAGGCGCCGCTCAGCCCTGTGGACGAGGTGTGGCCGAATGTGTTCATCGCTGAGAAGTCAGTGGCTGTGAATAAAGGCCGTCTGAAGCGTCTGGGCATCACTCATGTGCTGAACGCGGCTCACGGTACGGGTGTCTACACCGGCCCGCTCTTCTACTCCGGCATGAACATCCACTATATGGGCATCGAGGTGGACGACTTCCCGGACGCAGATATCTCCCCTCACTTCCGCTCGTGCGCAGAGTTCCTGGACGACGCTCTGCTCACACACAGGGGTAAGGTGCTGGTGGACTCGATGATGGGCGTGAGCCGGTCTGCGGTGCTCGTAGCTGCTTACCTGATGATCTTCCAGAACATGAGCATCATGGAGGCGCTGCTGGAGATCCGGAAGAAACGAGCCATCAGCCCCAACGAAGGCTTCATAAAGCAGCTGCGGCAGCTCAACGAGACCCTAATGGAGGAGCGGGACGAAGACGATGACGAGACGCTCAGCCAGTGCTCTGTGATCGACGCCCGCGGCCGGCTGGAGGAGCAGGAGAGTGTGTTCGGGGTGAAGGCGGACTCCATcatggtggaggaggaggaggatggagGAGGCAGCGTGATCAGCAGTGTTGCCTCTTCAGCTGCCGCCGCCGCTCTCCGAGCTGGAGTTCAATGTGGATCCCAGCAACCCAACATGCAGCAGCCAGCAGACCAGCCCTCGCTGCCGGGACAGACCCGCGAAGATGAGGATGGGGATGTGGACCGCATGATCCTTGAGTGGCAGAAGCGCAATGAGAAATACCAGAGTGAGGACTGGTGGGAGGCGCAGCTGCTGTGCGAAGATGAAGATGACGGAGAGGATAAGACACAGCGCGCCGTCCGGCCAGACGACCTGGAGAGTGTGACTAGTGAGGATGTGCGGATGGTGAAGGAGCGCATCGGGCGGCGTCCCCGCAGAGCTGCATCACTAGCCGGATCCACTTCCAGCTGCAGCAGCTACGTAGACCTGTGGAAGCAGCGGCTGCAGGAGCTGGAGGAGCAGGCGGCTGCACGACACCGCCTCCAAGACCAGGACACCAGCAGCGAAACACAACAAAAGAAGATCGACGACGATGTGCAGAGCATCCTCTCCGACAGCAGCTCTATGTACAACTTCTGCAAGAAGAACAAGGAGAATCTAACACCTCTGGAGAGATGGAAGATCAAGCGCATTCAGTTCGGCTGGAATAAGAAagagaacgcagagaacggagaGCAGAGCGAGGCTGAACCGGCGGCAGCTCCTGATCTGGAGGACGTCAACCTCACAGCCTATCAGACCTGGAAGCTAAAGCAGCAGAAGAAGCACGGCGGTGAAGAGAACAAGGAGGAGATCCTGCAGATGAGCCGAGGGGAGGACACGGCCACCGCCAGGAGGCGGCAGCGGAGGGAGGAGGTGCTGGAGCGCAGCCGCAGGAACCTGCAGGAGAGCCAGTCAGTATGTGGCTGGGAGACCGAGAGCGCTCTGAGCTCCAGCATCCCACTGTCTGCATTCTGCGCCGGAGCCTTTCCATCCGCCAGCGTCTGCGGAGACGACAGCATGTCTGTGCTGAGCGGGAGGTCCTCAGTGCTGTCAGGGCGAAGCACTCGATCTCTACCTCCTGCTGTCCTGGAGACTCCTGCACCACCCACTCCGGTGCTCGGGCCTAACGGAGAGCAAATGGTGAACATCGCCAACATCCAGAACTGGATCGCCAGTGTAGTGAATGAGACGCTCCAGCAGAAGCAGACGGAGATGCTGATGGGAGCGAGTGTCGCCCCGTCCCGAGCCGGATCCGTGTTCAGTGCTGGACGAGGAGTGGATGATGATAAATCCTCTGTTCTCAGTGGACTATCGGCCTCCACTGGACTGTCCCGCAGTAGGGCTGAATCTGTGGTGTCTGTGGGAGCGAAGGCCCGGTCAGTGCTGTCGGCCGCAGGTAGAGCTGAATCTGTGTTTTCTGCTGGTGGAGCATCTCAGCTGTCCTGTGGCTCGCGCAAAAGCAAGATTACCACCACAAGTGTGCCGCTGTACAGCCTCTTCCAGGACCAGGTGAACCTCCACAAGCTGGACACCATGGAGAAGGAGATCAAATCTGACATGCGGGACAAGATGGCCTCATACGAGATCAAGAAGATCACAGAGGACAACAAGCGCAGCACACTGTACAAGAAGAAAAAGCCAAAGGAGGATGACGAGGATGTAGATATAGCCAAGTCCAATGGGTTAGAGGAACTGGAAGCCCGTACTTGTGAGAAACCAAAACCCAAAAGAGATTACGGGCGTTCAGGAATACTGAACCTTCCGGCGTCAGCCAACAACCCGACCAGCAGCATCGATGAGTGGCTGGAACACGTCAGACCTCCGTCCAGCAAACCCAGAGTTTACGATGGCGACAGTGGTCCCATACGCATGTCTCGGCCAGCCTACGAGGAGCTGCAGGAACCTTCAGGGCTGGACTTTACGAGTCGCAGGAGCTCCGTTTCAGTAGAGGTGGATGAAGAGGAGGATTACAGCTTCAGGTTTTCCTCCAGGAATTGTGCTGATGATGATTTGGATCCAGAGTTGAGCTACTCGTCTCGCAGATCTCCGTCCTTTAACGGTTTAAGCGAATCTACGAGTTTCGCAAGCAGGAGGTCTTACTCTAGATATGAGGACGAGGAGCGGAGCAGCTTCCAGAACCACTCCATCAAGCAGAAATCATCGGTGTATGAGGACTCTGGGAGGACTGCTGGATCCAGACGGGACGAGGAGGAAGATGAGGAAATATCTGCGTTTATTGCTCAGATTAAACAGAGGGCGAGAGCGAGAGTCGCGGAGGAGATGGAGGACGATGAAGTGCTGACCGCATGGAGGAAGCAGGAAGAGTCAAAGTCACATGATCACAAATAATGCcaaatgatttattaaatcaCCATCTGTGCCAGAAAAGATAAAGTTGTCATAATGTGTATAGATTAGGGCTGCAGAATACATTGAAGAGTTCACGACAATAGATTATGCAGAGAAGTGCaataaataatgttcatttc

Function

symbol description
dusp27 Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Acts upstream of or within skeletal myofibril assembly. Predicted to be located in sarcomere. Is expressed in optic tectum and somite. Orthologous to human STYXL2 (serine/threonine/tyrosine interacting like 2).

GO:

id name namespace
GO:0014866 skeletal myofibril assembly biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0016311 dephosphorylation biological_process
GO:0030017 sarcomere cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0016791 phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-140513-1 Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Acts upstream of or within skeletal myofibril assembly. Predicted to be located in sarcomere. Is expressed in optic tectum and somite. Orthologous to human STYXL2 (serine/threonine/tyrosine interacting like 2).

Ensembl:

ensembl_id ENSDARG00000099889

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00076247 True 3484 mRNA 0.56 6 1250 8270

Neighbor

gene id symbol gene type direction distance location
XLOC_038760 CABZ01080371.1 coding downstream 11985 20255 ~ 23752 (+)
XLOC_038761 CABZ01080371.3 coding downstream 18443 26713 ~ 27407 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06352251_06359190 DUSP27 coding CI01000299 null 6351435 ~ 6360203 (-)