XLOC_038760 (CABZ01080371.1)


Basic Information

Item Value
gene id XLOC_038760
gene name CABZ01080371.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NW_018394426.1
NCBI id KZ116034.1
chromosome length 33615
location 20255 ~ 23752 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00076248
ctgcagCAGAGCCAGAAGCCGTCCTCGGAGGAGATCACACTGATTGCGGATCAGCTCAGCATGGAGAAGGAGGTGGTGCGTGTGTGGCTCTGCAACCGCCGGCAGAAGGAGAAGCGGATCTATCCACCCAGCAGCAGCGCAGCGTCTCCTGCATCCGCCATCAAGACCATCTACAGCACACAGACTGCAGCGgtgtccAGCGGCTCGAACACACTGACGGTGAATCCTGTGGTTCCTCTGAGCTCCAGCGGCCTCTCGAACCTCACGCTCAGCgGGGGTGCTCTGGGTCATGTGACCTCCAACACGCCCTCAGTCATCTCCATGGCGCCCGCCATCGCCACGCCTGCACCTGCTGTGACCTCGCAGACCCCGAGCTCCTCCGCCTCCGCTGGTAAACAGGAAATACGCGCTGCCACTTCCTCTGCTGCCACACTCACACAGGGGGCGGGGCCGTTGCTGGTGACGGGCGCAGGACTGGGTGGAGCCAATCTGACTACATTCGCTACGGGTTTGAACCCCACCATCATCACACCGTCACAGCTGGCACaaggggGGGCGCTGCTGAGCCTGGCTCCTGCTCTGGGAAACACACTGAGTCCTGCGCTGATGAACAATAACGCTCTGGCCACTATTCAGGctcTTGCGTCAGGCGGTGCTTTCCCCCTGACGTCTATTGATGGGAACACCAGCCTGCTCTTCGCCAACACCAGCGCAGCAAACTCCACCCCCAGCCTGGTGACCACGCCCTTTTTCCTTAATCCATCCGGCCTTTCTTTGCTGCCGGCCAATTTCCTGTCAGCAGGCGGGGCTGGAGGCGGAGCTCTCAACCTGCACCTGACCAGTGATGTGCAGCAGAATCTTGTTGCCACAACGACTAAGGGCGTGGCCCTGGCCTCGAAGGCTCAGTGAGCGTGTGCGGCTCCGCCCCCAATCCTGTTGCTGTTACCAAAAACACTGTGAGCGCAGGGCTGACGCCGCCGCCGCCGGGCTGGACTCTCAGACTAACACCTGAATTAACCAAATACCAGACTCTTTTCCAGCGCCGCTGATCTTTACCAGAGAATATTTGACCTAACAGAGTTTATATTGACTT
>TCONS_00076249
ctgcagCAGAGCCAGAAGCCGTCCTCGGAGGAGATCACACTGATTGCGGATCAGCTCAGCATGGAGAAGGAGGTGGTGCGTGTGTGGCTCTGCAACCGCCGGCAGAAGGAGAAGCGGATCTATCCACCCAGCAGCAGCGCAGCGTCTCCTGCATCCGCCATCAAGACCATCTACAGCACACAGACTGCAGCGgtgtccAGCGGCTCGAACACACTGACGGTGAATCCTGTGGTTCCTCTGAGCTCCAGCGGCCTCTCGAACCTCACGCCTGCACCTGCTGTGACCTCGCAGACCCCGAGCTCCTCCGCCTCCGCTGGTAAACAGGAAATACGCGCTGCCACTTCCTCTGCTGCCACACTCACACAGGGGGCGGGGCCGTTGCTGGTGACGGGCGCAGGACTGGGTGGAGCCAATCTGACTACATTCGCTACGGGTTTGAACCCCACCATCATCACACCGTCACAGCTGGCACaaggggGGGCGCTGCTGAGCCTGGCTCCTGCTCTGGGAAACACACTGAGTCCTGCGCTGATGAACAATAACGCTCTGGCCACTATTCAGGctcTTGCGTCAGGCGGTGCTTTCCCCCTGACGTCTATTGATGGGAACACCAGCCTGCTCTTCGCCAACACCAGCGCAGCAAACTCCACCCCCAGCCTGGTGACCACGCCCTTTTTCCTTAATCCATCCGGCCTTTCTTTGCTGCCGGCCAATTTCCTGTCAGCAGGCGGGGCTGGAGGCGGAGCTCTCAACCTGCACCTGACCAGTGATGTGCAGCAGAATCTTGTTGCCACAACGACTAAGGGCGTGGCCCTGGCCTCGAAGGCTCAGTGAGCGTGTGCGGCTCCGCCCCCAATCCTGTTGCTGTTACCAAAAACACTGTGAGCGCAGGGCTGACGCCGCCGCCGCCGGGCTGGACTCTCAGACTAACACCTGAATTAACCAAATACCAGACTCTTTTCCAGCGCCGCTGATCTTTACCAGAGAATATTTGACCTAACAGAGTTTATATTGACTTTATACGagggtttgtgtttttattagcgGCTCTGAGACGAGCCGAGTGCAGATTTATAACCAAAAGCGTGTGATGTTCAGCTGGAGGGTCTGCAGGAGTGTGAGCTCCACGACACTTTATAAAGACGGTTAGAAGCTTTACCTTACTGAGGAACCATGCGGCAGGACACACCACTGTCCCCACAACGCTTCCTCATctacacctgtgtgtgtgtgtgtgtgtgtgtgtgctgttagtTTCTGTCAGGTTTTTACTCTCCTCACACTCAGCGTTAGTGTTCACTACTGTTTCTGAAGCCAaagactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgctcctCTGTTCTCCTCAATCATCTGTTCTGACACACAC
>TCONS_00076250
ctgcagCAGAGCCAGAAGCCGTCCTCGGAGGAGATCACACTGATTGCGGATCAGCTCAGCATGGAGAAGGAGGTGGTGCGTGTGTGGCTCTGCAACCGCCGGCAGAAGGAGAAGCGGCAAACTCCACCCCCAGCCTGGTGACCACGCCCTTTTTCCTTAATCCATCCGGCCTTTCTTTGCTGCCGGCCAATTTCCTGTCAGCAGGCGGGGCTGGAGGCGGAGCTCTCAACCTGCACCTGACCAGTGATGTGCAGCAGAATCTTGTTGCCACAACGACTAAGGGCGTGGCCCTGGCCTCGAAGGCTCAGTGAGCGTGTGCGGCTCCGCCCCCAATCCTGTTGCTGTTACCAAAAACACTGTGAGCGCAGGGCTGACGCCGCCGCCGCCGGGCTGGACTCTCAGACTAACACCTGAATTAACCAAATACCAGACTCTTTTCCAGCGCCGCTGATCTTTACCAGAGAATATTTGACCTAACAGAGTTTATATTGACTTTATACGagggtttgtgtttttattagcgGCTCTGAGACGAGCCGAGTGCAGATTTATAACCAAAAGCGTGTGATGTTCAGCTGGAGGGTCTGCAGGAGTGTGAGCTCCACGACACTTTATAAAGACGGTTAGAAGCTTTACCTTACTGAGGAACCATGCGGCAGGACACACCACTGTCCCCACAACGCTTCCTCATctacacctgtgtgtgtgtgtgtgtgtgtgtgtgctgttagtTTCTGTCAGGTTTTTACTCTCCTCACACTCAGCGTTAGTGTTCACTACTGTTTCTGAAGCCAaagactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgctcctCTGTTCTCCTCAATCATCTGTTCTGACACACACCATGTTAGAGTATATATATAGAAGTGTGTGTGAAGAGTTTATTCAGTGAGTCCCAAAGCAGAACTCCTGTTCAGGATGAAAACCAAAGATTGtgtcctcctcctcttcctcttcctcctcctcctcttctgccTCCTTCATCTGACTGATCTTATAAAGCTGTTCGTTCTGTGAGACCCAGAGGAGCTTCTAGTGTTGATGGAGGAATGGTGAAGTGgcagcgctgtgtgtgtgtgtgtgtgtgtgtgtgatgcagaaGAGctgttctctctcacacacagagcagcgttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtcaTTTCTGTAGCTGTGGAGTTCATTAAATGTTTTCTCACACTGTTTCTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102550

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00076248 False 1093 mRNA 0.60 5 20255 22887
TCONS_00076249 False 1400 mRNA 0.56 5 20255 23269
TCONS_00076250 True 1260 mRNA 0.51 3 20255 23752

Neighbor

gene id symbol gene type direction distance location
XLOC_038759 dusp27 coding upstream 11985 1250 ~ 8270 (+)
XLOC_038761 CABZ01080371.3 coding downstream 2961 26713 ~ 27407 (+)

Expression


Co-expression Network