fhl5 (LOC106561894)


Basic Information

Item Value
gene id fhl5
gene name LOC106561894
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10167109 ~ 10184060 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585688.2
CCACTTAATCCTGGTTTACCCTTCTCCATCCCCACGCCTGGTCCTCACTCTGCAGCCCTCAATTCAGTCTCTCCTTGGAACCAACATAATCAGagGTTCCCGCAAAATGGAGTACAAGGGGAACAGCTGGCATGAGACCTGCTTCCTGTGCCATCGCTGCCAGCAGCCAATAGGAACCAAGTCCTTCATCCCCAAAGACAACGGCTACTTCTGCGTGTCCTGTTTTGAGAAGCAATTTGCCTATCAGTGCTGTGCCTGTAAAAAAGCCATTACGACCGGTGGGGTGACCTACAATGACAAACCCTGGCACCGTGAGTGTTTCCTGTGCATCGGCTGTAAGAAGCAGCTATCAGGACAGCGCTTCACCTCCAGAGAGAACTACCCCTACTGTCTGGACTGCTTTAGCAACCTCTATGCCAAGAAGTGTGTGGGTTGCACCAAACCCATCACCAGTCTGGCAGGGGCCAAGTACATCTCCTTTGAGGAGCGCCAGTGGCACAGCGAGTGTTTCACCTGTATGCAGTGCTCCGTGTCTCTAGTGGGCCGTGGCTTCCTCACCCAGCGTGACGACATCCTGTGCACCGACTGCGGCAGAGAGAAGTGACCTCACTGGGGAGATCGCAACCTTATGACCTTTTAATAATCCAGCACAGGTCACACCACACTCGAACCATACTACAACACATTCTGAAACACCACACCAAAACCCTACCCAGCAGGAAGTGACCTCAGCAGATGGTCACTATATTGACCTTTACATCGTTCTATTGTTGTTTCAGTGTTGTGACATTTGTGAGGGGAGGAGCCTTTGATGTACACCTGTAGCTTCCCCCTTCAAGAGTAGTAATAGAATCTTATGACGAAGTTAAATGTATGATTTACAGAATAATCTCACTTGTGATAATCTAAATGACAGGGATGTACTTGACATCAATTACATCAATTTGACATCAATTAATTTGTCTGCACATTAGTCTTTGCTGTTTGCATGTTTTATGTTTTCATCATTATTAAAATCAAAGTAATAGTAGTTTAAATAAGGTGACAATCTAAATTGAGTGGTTCATTTTTGTTCAAATCTAAATTCAGACCTTGATTTATGAATGCATCTGTGATGTTAAATGAATAGCACCGCTTTGCCTTAATTAATAAAAGTA
>XM_021585687.2
TGATGTGCCCACTTAATCCTGGTTTACCCTTCTCCATCCCCACGCCTGGTCCTCACTCTGCAGCCCTCAATTCAGTCTCTCCTTGGAACCAACATAATCAGagGATCTGTCCTATAAGGATTGCCACTGGCATGAGCAGTGCTTCAAGTGTGCCAAATGCAGCCGCCCTCTGGTAGAAAAGCCATTTGCAGCTAAGGATGAACAACTTCTCTGCACAGAGTGTTACTCCCATGAGTACTCCTCCAAATGCTCCACCTGCAAGAAAACCATCATGCCAGGTTCCCGCAAAATGGAGTACAAGGGGAACAGCTGGCATGAGACCTGCTTCCTGTGCCATCGCTGCCAGCAGCCAATAGGAACCAAGTCCTTCATCCCCAAAGACAACGGCTACTTCTGCGTGTCCTGTTTTGAGAAGCAATTTGCCTATCAGTGCTGTGCCTGTAAAAAAGCCATTACGACCGGTGGGGTGACCTACAATGACAAACCCTGGCACCGTGAGTGTTTCCTGTGCATCGGCTGTAAGAAGCAGCTATCAGGACAGCGCTTCACCTCCAGAGAGAACTACCCCTACTGTCTGGACTGCTTTAGCAACCTCTATGCCAAGAAGTGTGTGGGTTGCACCAAACCCATCACCAGTCTGGCAGGGGCCAAGTACATCTCCTTTGAGGAGCGCCAGTGGCACAGCGAGTGTTTCACCTGTATGCAGTGCTCCGTGTCTCTAGTGGGCCGTGGCTTCCTCACCCAGCGTGACGACATCCTGTGCACCGACTGCGGCAGAGAGAAGTGACCTCACTGGGGAGATCGCAACCTTATGACCTTTTAATAATCCAGCACAGGTCACACCACACTCGAACCATACTACAACACATTCTGAAACACCACACCAAAACCCTACCCAGCAGGAAGTGACCTCAGCAGATGGTCACTATATTGACCTTTACATCGTTCTATTGTTGTTTCAGTGTTGTGACATTTGTGAGGGGAGGAGCCTTTGATGTACACCTGTAGCTTCCCCCTTCAAGAGTAGTAATAGAATCTTATGACGAAGTTAAATGTATGATTTACAGAATAATCTCACTTGTGATAATCTAAATGACAGGGATGTACTTGACATCAATTACATCAATTTGACATCAATTAATTTGTCTGCACATTAGTCTTTGCTGTTTGCATGTTTTATGTTTTCATCATTATTAAAATCAAAGTAATAGTAGTTTAAATAAGGTGACAATCTAAATTGAGTGGTTCATTTTTGTTCAAATCTAAATTCAGACCTTGATTTATGAATGCATCTGTGATGTTAAATGAATAGCACCGCTTTGCCTTAATTAATAAAAGT
>XM_021585686.2
TCAATGATGTGCCCACTTAATCCTGGTTTACCCTTCTCCATCCCCACGCCTGGTCCTCACTCTGCAGCCCTCAATTCAGTCTCTCCTTGGAACCAACATAATCAGagGTAAAGAGCAAGCATGTCTACAGAGCGGTTTGACTGCCATTACTGCAAGGAGTCCTTGTTGGGAAATAAATATATTATGAAGGAGGATACTCAGTACTGCACTAAGTgctatgagaacttgttctccaaTTGCTGTGAAGTGTGCTCTCTGCCTATTGGGTGCAACTGTAAGGATCTGTCCTATAAGGATTGCCACTGGCATGAGCAGTGCTTCAAGTGTGCCAAATGCAGCCGCCCTCTGGTAGAAAAGCCATTTGCAGCTAAGGATGAACAACTTCTCTGCACAGAGTGTTACTCCCATGAGTACTCCTCCAAATGCTCCACCTGCAAGAAAACCATCATGCCAGGTTCCCGCAAAATGGAGTACAAGGGGAACAGCTGGCATGAGACCTGCTTCCTGTGCCATCGCTGCCAGCAGCCAATAGGAACCAAGTCCTTCATCCCCAAAGACAACGGCTACTTCTGCGTGTCCTGTTTTGAGAAGCAATTTGCCTATCAGTGCTGTGCCTGTAAAAAAGCCATTACGACCGGTGGGGTGACCTACAATGACAAACCCTGGCACCGTGAGTGTTTCCTGTGCATCGGCTGTAAGAAGCAGCTATCAGGACAGCGCTTCACCTCCAGAGAGAACTACCCCTACTGTCTGGACTGCTTTAGCAACCTCTATGCCAAGAAGTGTGTGGGTTGCACCAAACCCATCACCAGTCTGGCAGGGGCCAAGTACATCTCCTTTGAGGAGCGCCAGTGGCACAGCGAGTGTTTCACCTGTATGCAGTGCTCCGTGTCTCTAGTGGGCCGTGGCTTCCTCACCCAGCGTGACGACATCCTGTGCACCGACTGCGGCAGAGAGAAGTGACCTCACTGGGGAGATCGCAACCTTATGACCTTTTAATAATCCAGCACAGGTCACACCACACTCGAACCATACTACAACACATTCTGAAACACCACACCAAAACCCTACCCAGCAGGAAGTGACCTCAGCAGATGGTCACTATATTGACCTTTACATCGTTCTATTGTTGTTTCAGTGTTGTGACATTTGTGAGGGGAGGAGCCTTTGATGTACACCTGTAGCTTCCCCCTTCAAGAGTAGTAATAGAATCTTATGACGAAGTTAAATGTATGATTTACAGAATAATCTCACTTGTGATAATCTAAATGACAGGGATGTACTTGACATCAATTACATCAATTTGACATCAATTAATTTGTCTGCACATTAGTCTTTGCTGTTTGCATGTTTTATGTTTTCATCATTATTAAAATCAAAGTAATAGTAGTTTAAATAAGGTGACAATCTAAATTGAGTGGTTCATTTTTGTTCAAATCTAAATTCAGACCTTGATTTATGAATGCATCTGTGATGTTAAATGAATAGCACCGCTTTGCCTTAATTAATAAAAGT

Function

NR:

description
four and a half LIM domains protein 2-like isoform X1

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585688.2 False 1157 mRNA 0.45 4 10167109 10184048
XM_021585687.2 False 1339 mRNA 0.46 5 10167110 10184056
XM_021585686.2 True 1515 mRNA 0.45 6 10167110 10184060

Neighbor

gene id symbol gene type direction distance location
LOC110506256 LOC106561895 coding downstream 40110 10121050 ~ 10126999 (-)
gtf2a2 gtf2a2 coding downstream 772695 9391961 ~ 9394414 (-)
otud7a LOC106591491 coding downstream 782118 9258976 ~ 9384991 (-)
LOC110516734 LOC107593117 coding downstream 1058860 9090166 ~ 9108249 (-)
LOC118944560 LOC106587999 coding downstream 1093767 9043417 ~ 9073342 (-)
fut9a LOC106561893 coding upstream 29474 10213534 ~ 10225704 (-)
manea LOC106561892 coding upstream 44284 10228344 ~ 10238666 (-)
syt14a syt14 coding upstream 123237 10307297 ~ 10440791 (-)
LOC110506249 NA coding upstream 267849 10451909 ~ 10453142 (-)
zgc:85722 LOC106561887 coding upstream 271141 10455201 ~ 10547182 (-)
G1996172 NA non-coding downstream 46899 10119609 ~ 10120210 (-)
G1995307 NA non-coding downstream 60373 10106382 ~ 10106736 (-)
G1995301 NA non-coding downstream 69173 10078163 ~ 10097936 (-)
G1995296 NA non-coding downstream 70975 10073732 ~ 10096134 (-)
G1996244 NA non-coding upstream 12251 10196311 ~ 10196531 (-)
G1996249 NA non-coding upstream 21245 10205305 ~ 10205540 (-)
G1996251 NA non-coding upstream 23254 10207314 ~ 10207622 (-)
G1996202 NA non-coding upstream 42045 10226105 ~ 10228239 (-)
G1996207 gnmt non-coding upstream 84972 10269032 ~ 10277730 (-)
G1994812 NA other downstream 665456 9500716 ~ 9501653 (-)
G1994786 NA other downstream 718615 9447593 ~ 9448494 (-)
G1994674 NA other downstream 986404 9177038 ~ 9180705 (-)
LOC110527031 LOC106587988 other downstream 1418365 8564300 ~ 8805872 (-)
G1996632 NA other upstream 737956 10922016 ~ 10924533 (-)
G1996949 NA other upstream 1234039 11418099 ~ 11418335 (-)
G1999856 NA other upstream 3153275 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 3336626 13520686 ~ 13521520 (-)
G2000052 NA other upstream 3445724 13629784 ~ 13630075 (-)

Expression


Co-expression Network