LOC110506249


Basic Information

Item Value
gene id LOC110506249
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10451909 ~ 10453142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470939.2
taagcagcttggtttgaagaaatcaactgtgggagcacaatggtttgttttatttattttttacaatttatttTTGTATCAGACATATTTCAATATCTTAGATTGTCAATAGATATTGCTTTCCTACCCCCTCCTCCAGGTTTGGTGAATGGACCAACCAGACCCTCAAGACTGCCATGGGCAAGTCCCTTGATTGGTACCAGGAAGGGTGGGCAAACAACCTGAAGGTAATTCTCTTTGCACACAACAGCAGCATCCAGGTCTCCACCGAGTACGGACAGGAGCCGCAGCTGTTGACTCAGATCACTGGAACCCGAGCTGATGTGGTGGAAGCTGTCAAATCAGATTAGAACGCCTTCAAGGACCACCTTCAGGCACGGACTAAGAAGGATGTGGAGGTTTTTGACCAGTCAAGGTGGACTGAACATCAACAAGGCgcaggagaaacagaaggagagctACCGGAGCAGAATCAAGCACAGGAGCAAGTGCTACGACATCCAAGCGAATTACTTGGTTTGGAAGAAGAACGAAAGGAAGGCGAGACCTGGGAAACCTCGTTGTTCTTTCACTCCTAGCTGGGGTCACCATCTGTTAAAGTGAATATAAAAAATCTCAGATAATAACTattttcatttgcacacaaaataacCTGAAGCTTGTTTTAGTTTCCCTAACACTGATATTTTTCTGGCTCTATCATACTGGGCACGTAATATGTGAGATGCAAAGATTAACTAAAAACACTAGCACTGCAAAAAAGTGAGCAGCAGTGCCCAGACTTTGCAGCCTCCCTATTCAATTTCCCCTTCCaagactggctgcctgttgagaagTGACCGGCAGAACCTCCCACCCACACAGCAACCACCTCCTCTATATTCCACACTCCAGAATTCAGTATTTTAGTCTGATTGCCATGTGAATgtacaaaaaaatctgaaaataaaTTCCTGACACAACTGTAccaaaaaatataaacatttaTGTATAAAAATATTAAATATTGCCAGGTTGGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570113 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470939.2 True 1019 mRNA 0.43 3 10451909 10453142

Neighbor

gene id symbol gene type direction distance location
syt14a syt14 coding downstream 11118 10307297 ~ 10440791 (-)
manea LOC106561892 coding downstream 213243 10228344 ~ 10238666 (-)
fut9a LOC106561893 coding downstream 226205 10213534 ~ 10225704 (-)
fhl5 LOC106561894 coding downstream 267849 10167109 ~ 10184060 (-)
LOC110506256 LOC106561895 coding downstream 324910 10121050 ~ 10126999 (-)
zgc:85722 LOC106561887 coding upstream 2059 10455201 ~ 10547182 (-)
kcnk5a kcnk5 coding upstream 135328 10588470 ~ 10645882 (-)
kcnk17 LOC106562019 coding upstream 240432 10693574 ~ 10733938 (-)
LOC110506078 kif6 coding upstream 320904 10774046 ~ 10873761 (-)
kif6 kif6 coding upstream 429062 10882204 ~ 10986615 (-)
G1996326 NA non-coding downstream 84529 10367178 ~ 10367380 (-)
G1996325 NA non-coding downstream 84787 10366886 ~ 10367122 (-)
G1996321 NA non-coding downstream 87227 10364479 ~ 10364682 (-)
G1996318 NA non-coding downstream 91659 10360029 ~ 10360250 (-)
G1996309 NA non-coding downstream 102976 10348578 ~ 10348933 (-)
G1996216 NA non-coding upstream 168097 10621239 ~ 10622131 (-)
G1996452 NA non-coding upstream 201575 10654717 ~ 10654950 (-)
G1996455 NA non-coding upstream 207171 10660313 ~ 10660786 (-)
G1996479 NA non-coding upstream 243878 10697020 ~ 10697333 (-)
G1996485 NA non-coding upstream 257164 10710306 ~ 10710554 (-)
G1994812 NA other downstream 950256 9500716 ~ 9501653 (-)
G1994786 NA other downstream 1003415 9447593 ~ 9448494 (-)
G1994674 NA other downstream 1271204 9177038 ~ 9180705 (-)
LOC110516734 LOC107593117 other downstream 1343750 9090166 ~ 9108249 (-)
LOC110527031 LOC106587988 other downstream 1703165 8564300 ~ 8805872 (-)
G1996632 NA other upstream 468874 10922016 ~ 10924533 (-)
G1996949 NA other upstream 964957 11418099 ~ 11418335 (-)
G1999856 NA other upstream 2884193 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 3067544 13520686 ~ 13521520 (-)
G2000052 NA other upstream 3176642 13629784 ~ 13630075 (-)

Expression


Co-expression Network