LOC118944497


Basic Information

Item Value
gene id LOC118944497
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 11323168 ~ 11325682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039835.1
CTCTTTATGCAGCCTGTACGTAGATGCAAGAGAAAGATGCCCATGCAGAGTCCAGAGGATAAGACAGCCGAAGACCAAAGTGGACTAGGATGCTGGTCCCAGCATGCCTATGAAAGGAAAATATTGCTTGTCTTACCCAGGTACCAGCAGTCTTGGACCTATTGGTAAAATTACTTTTACAACCAGTCAAAGGTCTTGAAGTGGTGATCCGCAGGTACCATAAAGTCCTGAAGACCAAGAAGTTCCGGACCATGTCTGAGGCTTTGCATTACAACAACGTGGATAGAGGCACCATCACAGCCACAATACCGATCGCCAAACCCCTGTACAAGGAAATCTACAGCACCCTGGTGTTCGACCCATGAATAGAAACACTGCTTGCATTCACAAAGTGTTGTGCCGGCCATGTAACACCAGAGAATAAGAAGGTGATAGAGGATATGAAAGCAAGAGGCCATTTGCTCCCATTACAGATAAAGTATAGTATATCATTGATAGTCTCAGCTATGTTGCTCTGATAAGATACAGAGTTTAGAAGTTCTGTTAGAAGTGAGATGTTTTTACATTCTCCACTTTATTACACAGGTCTACATTCCGTGCACCTGCACTTTAGTCCAAACCCAGGgtcccacgtgtgtgtgtgtgtgagtgtgtgtgtgagagagtgagaaagcCAGTATGCTTGTCTGTGGTCAAAAAAAAACTGTACTAAGAAAGGCAAATatactgagtgagtgagtgggggcaCAACAGATAGTACAcactgtcatgactctcctgtgaagttctgaaggatcaggttacagtgggtccgCTCTACagcaccctctctctcccgcagagggggagaggggtgaagTTGGCAGTTTTATAACGGTCGTAAATACCTGCAGGAactctctcccactctgcagAAATGGAAGTTAAAAATCCCTTTGCTACAGCAGAGAGAGATTTTGTAGTACAGTGACATCCATGATTGGATAATGAAacaatattttttaaatccaaaCAGTTGGAATGGTCCGTGGGTACTTAAAGAACAAttatgtcagatcagttgttgttTTGGGATCTCATTAAGGACAGTATAACATAACTGTGTCTCTGAATGTGTATATTTCCCAGTTGTCAGGTTAACATCTAAATGTAGTGGAATTTATAGGATTAAATATAAAACCATATGTGAGAAGATGAAATGTAATGTTAGCTTTCTAAATGATAATTGTTTTTCATATAAAAGTTCCACCCAGTCAGTGACCACACCCACGTGAGCACAGATATTATGTCGGCGTCATGGAATGCCCCCTTTTGCCAGACTGCATAAAACCCCTCCTAACGAAATTTACTTTAGACCAAGCAGGCAGACGGTGTTGAACCGGACGTTACAAATGGTTAGACTCTATGAGACCAGAAAAACATGGAGCGTGGCTGCAATGGTAATGGTAAATGGTAAGAATTTAAATCTCTAGAGACCAGTACATTGCCGGGTTGCTACCTGAAATGCAGAATATCCTTTTTTTATGTATCTTTGTAGAACTTTGACCTTTTCTGAGTCACACAAAATCATAGTTTCTATCACTCCTTCAGTCTTCTGTGGACTTTATATGTTGGTTGGCAagcaactttaaggtgcattacaaCCACCAACTAAACTctagtgtggacctcagttcatctttcaatcaccaaAGTGGtgatatgctcctaaaaaccaatgaggtgATGGAAGAGGTGGAATTTGCAGCTAGTCAAGCGTCAAAAATAGttatattttagcgcctggctacccAGACACGCAGAAACAGTTTAGAttaaatgattgaataacatgtatgtgtacatttattttgcaatgctcacagtgtggtcagcatgttagaaaaaagggttccaaaagtgttctttggctgtccccaaaacacgttttggttccaggtataacccttttggattccatgaagaaccctctgtggaaaaggttCTACATGGTACCCAAAAGGGTTGTACCTGcaaccaaaaatatt

Function

NR:

description
Coiled-coil domain-containing protein 106

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039835.1 True 2027 mRNA 0.42 3 11323168 11325682

Neighbor

gene id symbol gene type direction distance location
mocs1 LOC100196496 coding downstream 21751 11251835 ~ 11301417 (-)
LOC118944586 NA coding downstream 274596 11048419 ~ 11048572 (-)
kif6 kif6 coding downstream 336553 10882204 ~ 10986615 (-)
LOC110506078 kif6 coding downstream 449407 10774046 ~ 10873761 (-)
kcnk17 LOC106562019 coding downstream 589230 10693574 ~ 10733938 (-)
LOC110506257 LOC106561882 coding upstream 712450 12038132 ~ 12419690 (-)
LOC110506258 LOC106561881 coding upstream 1244515 12570197 ~ 12616568 (-)
LOC110506259 LOC106561880 coding upstream 1349882 12675564 ~ 12688280 (-)
LOC110506260 LOC106561879 coding upstream 1389621 12715303 ~ 12740943 (-)
LOC110506264 LOC106561878 coding upstream 1450811 12776493 ~ 12835289 (-)
G1996810 NA non-coding downstream 123699 11198918 ~ 11199469 (-)
G1996807 NA non-coding downstream 125966 11196928 ~ 11197202 (-)
G1996805 daam2 non-coding downstream 126804 11196052 ~ 11196364 (-)
G1996671 NA non-coding downstream 240343 11055772 ~ 11082825 (-)
G1996714 NA non-coding downstream 270033 11052863 ~ 11053135 (-)
G1996901 NA non-coding upstream 23410 11349092 ~ 11416113 (-)
G1996980 NA non-coding upstream 116703 11442385 ~ 11442588 (-)
G1997082 NA non-coding upstream 122274 11447956 ~ 11527922 (-)
G1997147 NA non-coding upstream 205311 11530993 ~ 11536751 (-)
G1997232 NA non-coding upstream 288621 11614303 ~ 11614550 (-)
G1996632 NA other downstream 398635 10922016 ~ 10924533 (-)
G1994812 NA other downstream 1821515 9500716 ~ 9501653 (-)
G1994786 NA other downstream 1874674 9447593 ~ 9448494 (-)
G1994674 NA other downstream 2142463 9177038 ~ 9180705 (-)
LOC110516734 LOC107593117 other downstream 2215009 9090166 ~ 9108249 (-)
G1996949 NA other upstream 92417 11418099 ~ 11418335 (-)
G1999856 NA other upstream 2011653 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 2195004 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2304102 13629784 ~ 13630075 (-)
G2000879 NA other upstream 2952459 14278141 ~ 14278746 (-)

Expression


Co-expression Network