G1996562



Basic Information


Item Value
gene id G1996562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10832999 ~ 10833207 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2285108
gaccagagcactatgggtcccGGTTAAAAgcagtgaatagggtgccatttgggatgcagcctatgATTCCTAATAGTGAACAGAAAAAAACAGAACATTCTGCTTTGGGGGCCCTGTTTCTCTGAAGTGTCCAAGTGTCGCTCAGCACATTCCAGAACTTTTCCAGGACTGGCGAGAAAGGGTGGCTCCCCTGAAGGCTGTTTTATGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2285108 True 209 lncRNA 0.49 1 10832999 10833207

Neighbor


gene id symbol gene type direction distance location
kcnk17 LOC106562019 coding downstream 99061 10693574 ~ 10733938 (-)
kcnk5a kcnk5 coding downstream 187117 10588470 ~ 10645882 (-)
zgc:85722 LOC106561887 coding downstream 285817 10455201 ~ 10547182 (-)
LOC110506249 NA coding downstream 379857 10451909 ~ 10453142 (-)
syt14a syt14 coding downstream 392208 10307297 ~ 10440791 (-)
kif6 kif6 coding upstream 48997 10882204 ~ 10986615 (-)
LOC118944586 NA coding upstream 215212 11048419 ~ 11048572 (-)
mocs1 LOC100196496 coding upstream 418628 11251835 ~ 11301417 (-)
LOC118944497 NA coding upstream 489961 11323168 ~ 11325682 (-)
LOC110506257 LOC106561882 coding upstream 1204925 12038132 ~ 12419690 (-)
G1996553 NA non-coding downstream 13904 10818606 ~ 10819095 (-)
G1996548 NA non-coding downstream 25418 10807272 ~ 10807581 (-)
G1996545 NA non-coding downstream 28010 10804596 ~ 10804989 (-)
G1996544 NA non-coding downstream 28865 10803910 ~ 10804134 (-)
G1996533 NA non-coding downstream 47374 10785335 ~ 10785625 (-)
G1996564 NA non-coding upstream 634 10833841 ~ 10834047 (-)
G1996575 NA non-coding upstream 21160 10854367 ~ 10854614 (-)
G1996580 NA non-coding upstream 25505 10858712 ~ 10859018 (-)
G1996689 NA non-coding upstream 181749 11014956 ~ 11016796 (-)
G1996690 NA non-coding upstream 184234 11017441 ~ 11018390 (-)
G1994812 NA other downstream 1331346 9500716 ~ 9501653 (-)
G1994786 NA other downstream 1384505 9447593 ~ 9448494 (-)
G1994674 NA other downstream 1652294 9177038 ~ 9180705 (-)
LOC110516734 LOC107593117 other downstream 1724840 9090166 ~ 9108249 (-)
LOC110527031 LOC106587988 other downstream 2084255 8564300 ~ 8805872 (-)
G1996632 NA other upstream 88809 10922016 ~ 10924533 (-)
G1996949 NA other upstream 584892 11418099 ~ 11418335 (-)
G1999856 NA other upstream 2504128 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 2687479 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2796577 13629784 ~ 13630075 (-)

Expression



Co-expression Network