G1997147



Basic Information


Item Value
gene id G1997147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 11530993 ~ 11536751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2285713
agtaattttgctttgaacGTTAATAAACTtataaactcacttttgagaaaatggcctttgaatattttggtatctagtgaagagctcttctttgtctacacccattcagcataaTTTACATCCTCTTAAAGCTTTAGTCCCACCCATCTTGTTTTGGTCTCAGAGCATTCAGAGCGAACACTTGACACTCTGGCTGATGATATGTTTACCTTTATTGcagacatttactgacaccggcagTATTCAACGGAtgttgtacactttagcttaagacatgtagctagcaagctaagtAAACAGCGTGTATGATCACACACGTCACATAAGGTTAGCTAACGAGTAAGCCAGCTAATGTttgctagttaaacaacaatgaacaaagtgccaaatcatgtcgttactaccctgcatgaatatgCTGAAAGCTAACAAACCAGgttcaatattagctagctaacattaggctctaactagaaaagcaaacggCTCTGGAATATGAATAAGGGagccagctaactaacagtacactttagcttgaaattaaaccactttGTCAAAATTTGAAACgtttaatatctgaaaatgtatacatcatcatgcatACCATGGTTGCCCTGAGTTTGAAGATGTattccggagacaggtgttttctccatctctttatcatactccaattccactgatttcaaatctTGATCCTTCAGAAAGTTGAGAggaactgttacggtgcgtgaatgaggacccaaaagcgaattaacttaaacagagcttctttaattaccaaacataggtaggctcagacggaccggcagattccgacaggacaagacaaggttacagcaaacatgacgacagtctggttcaggcatgaaacacaacaaacaagaatccgacaaagacaggaacaaaaacagagagagatatagaggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtagttaggaggagacaaggcacagctgggggaaagagggggagaaaaggtaacctaacaacgaccagcagagggagacagggtgaagggaaaggacagagacaagacacaacatgacagtacatgac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2285713 True 1103 lncRNA 0.41 2 11530993 11536751

Neighbor


gene id symbol gene type direction distance location
LOC118944497 NA coding downstream 205311 11323168 ~ 11325682 (-)
mocs1 LOC100196496 coding downstream 229576 11251835 ~ 11301417 (-)
LOC118944586 NA coding downstream 482421 11048419 ~ 11048572 (-)
kif6 kif6 coding downstream 544378 10882204 ~ 10986615 (-)
LOC110506078 kif6 coding downstream 657232 10774046 ~ 10873761 (-)
LOC110506257 LOC106561882 coding upstream 501381 12038132 ~ 12419690 (-)
LOC110506258 LOC106561881 coding upstream 1033446 12570197 ~ 12616568 (-)
LOC110506259 LOC106561880 coding upstream 1138813 12675564 ~ 12688280 (-)
LOC110506260 LOC106561879 coding upstream 1178552 12715303 ~ 12740943 (-)
LOC110506264 LOC106561878 coding upstream 1239742 12776493 ~ 12835289 (-)
G1997082 NA non-coding downstream 3071 11447956 ~ 11527922 (-)
G1996980 NA non-coding downstream 88405 11442385 ~ 11442588 (-)
G1996858 NA non-coding downstream 114157 11294684 ~ 11416836 (-)
G1996901 NA non-coding downstream 114880 11349092 ~ 11416113 (-)
G1996810 NA non-coding downstream 331524 11198918 ~ 11199469 (-)
G1997232 NA non-coding upstream 77552 11614303 ~ 11614550 (-)
G1997241 NA non-coding upstream 84045 11620796 ~ 11621034 (-)
G1997247 NA non-coding upstream 86782 11623533 ~ 11623756 (-)
G1997291 NA non-coding upstream 107512 11644263 ~ 11653638 (-)
G1999008 NA non-coding upstream 455194 11991945 ~ 11992317 (-)
G1996949 NA other downstream 112658 11418099 ~ 11418335 (-)
G1996632 NA other downstream 606460 10922016 ~ 10924533 (-)
G1994812 NA other downstream 2029340 9500716 ~ 9501653 (-)
G1994786 NA other downstream 2082499 9447593 ~ 9448494 (-)
G1994674 NA other downstream 2350288 9177038 ~ 9180705 (-)
G1999856 NA other upstream 1800584 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 1983935 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2093033 13629784 ~ 13630075 (-)
G2000879 NA other upstream 2741390 14278141 ~ 14278746 (-)
LOC110506276 LOC106587060 other upstream 3096251 14613586 ~ 14678505 (-)

Expression



Co-expression Network