Gene
RNA
| Item | Value |
|---|---|
| gene id | G1999502 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 12742070 ~ 12742271 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc3 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2288136 | True | 202 | lncRNA | 0.48 | 1 | 12742070 | 12742271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506260 | LOC106561879 | coding | downstream | 1127 | 12715303 ~ 12740943 (-) |
| LOC110506259 | LOC106561880 | coding | downstream | 53790 | 12675564 ~ 12688280 (-) |
| LOC110506258 | LOC106561881 | coding | downstream | 125502 | 12570197 ~ 12616568 (-) |
| LOC110506257 | LOC106561882 | coding | downstream | 322380 | 12038132 ~ 12419690 (-) |
| LOC118944497 | NA | coding | downstream | 1416388 | 11323168 ~ 11325682 (-) |
| LOC110506264 | LOC106561878 | coding | upstream | 34222 | 12776493 ~ 12835289 (-) |
| LOC118944582 | NA | coding | upstream | 39121 | 12781392 ~ 12781526 (-) |
| LOC118944583 | NA | coding | upstream | 49640 | 12791911 ~ 12792045 (-) |
| trmt61b | trmt61b | coding | upstream | 103208 | 12845479 ~ 12856664 (-) |
| LOC110506271 | LOC106561903 | coding | upstream | 1576033 | 14318304 ~ 14368873 (-) |
| G1999488 | NA | non-coding | downstream | 28337 | 12713439 ~ 12713733 (-) |
| G1999479 | LOC100846954 | non-coding | downstream | 40038 | 12701700 ~ 12702032 (-) |
| G1999477 | NA | non-coding | downstream | 41130 | 12700649 ~ 12700940 (-) |
| G1999475 | NA | non-coding | downstream | 42742 | 12699034 ~ 12699328 (-) |
| G1999474 | NA | non-coding | downstream | 43551 | 12698264 ~ 12698519 (-) |
| G1999505 | LOC103376403 | non-coding | upstream | 2740 | 12745011 ~ 12745250 (-) |
| G1999517 | NA | non-coding | upstream | 13193 | 12755464 ~ 12759728 (-) |
| G1999586 | NA | non-coding | upstream | 165131 | 12907402 ~ 12954741 (-) |
| G1999611 | NA | non-coding | upstream | 197233 | 12939504 ~ 12939821 (-) |
| G1999697 | NA | non-coding | upstream | 343116 | 13085387 ~ 13085707 (-) |
| G1996949 | NA | other | downstream | 1323735 | 11418099 ~ 11418335 (-) |
| G1996632 | NA | other | downstream | 1817537 | 10922016 ~ 10924533 (-) |
| G1994812 | NA | other | downstream | 3240417 | 9500716 ~ 9501653 (-) |
| G1994786 | NA | other | downstream | 3293576 | 9447593 ~ 9448494 (-) |
| G1994674 | NA | other | downstream | 3561365 | 9177038 ~ 9180705 (-) |
| G1999856 | NA | other | upstream | 595064 | 13337335 ~ 13338151 (-) |
| G1999980 | LOC106561221 | other | upstream | 778415 | 13520686 ~ 13521520 (-) |
| G2000052 | NA | other | upstream | 887513 | 13629784 ~ 13630075 (-) |
| G2000879 | NA | other | upstream | 1535870 | 14278141 ~ 14278746 (-) |
| LOC110506276 | LOC106587060 | other | upstream | 1890731 | 14613586 ~ 14678505 (-) |
