G1999772



Basic Information


Item Value
gene id G1999772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 13204693 ~ 13204918 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2288425
GTATGTAAGTTGGCCAGTGCATAACAACAGTACACAACAACAGTACACGTGGccttcacatttgtgtttttttaaatgaccTCCAAACCCATACTATGTCTCTCCAGATGCAATGTGGTACTTTCACTCTAGACGGACTGATAAACTAAAtatgtggattcggctatttctgccacacccgttgctgacaggtgtataaaatcgagcacacagccatgtattttcc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2288425 True 226 lncRNA 0.42 1 13204693 13204918

Neighbor


gene id symbol gene type direction distance location
trmt61b trmt61b coding downstream 348029 12845479 ~ 12856664 (-)
LOC110506264 LOC106561878 coding downstream 369404 12776493 ~ 12835289 (-)
LOC118944583 NA coding downstream 412648 12791911 ~ 12792045 (-)
LOC118944582 NA coding downstream 423167 12781392 ~ 12781526 (-)
LOC110506260 LOC106561879 coding downstream 463750 12715303 ~ 12740943 (-)
LOC110506271 LOC106561903 coding upstream 1113386 14318304 ~ 14368873 (-)
LOC110506081 prmt3 coding upstream 1172500 14377418 ~ 14496552 (-)
LOC110506276 LOC106587060 coding upstream 1408668 14613586 ~ 14678505 (-)
LOC110506082 LOC106561908 coding upstream 1498190 14703108 ~ 14788733 (-)
LOC110506277 NA coding upstream 1689577 14894495 ~ 14898577 (-)
G1999697 NA non-coding downstream 118986 13085387 ~ 13085707 (-)
G1999586 NA non-coding downstream 249952 12907402 ~ 12954741 (-)
G1999611 NA non-coding downstream 264872 12939504 ~ 12939821 (-)
G1999517 NA non-coding downstream 444965 12755464 ~ 12759728 (-)
G1999505 LOC103376403 non-coding downstream 459443 12745011 ~ 12745250 (-)
G1999784 NA non-coding upstream 19788 13224706 ~ 13225022 (-)
G1999785 NA non-coding upstream 23321 13228239 ~ 13228454 (-)
G1999787 LOC106561338 non-coding upstream 25838 13230756 ~ 13231280 (-)
G1999789 NA non-coding upstream 29635 13234553 ~ 13234772 (-)
G1999790 NA non-coding upstream 31008 13235926 ~ 13236216 (-)
G1996949 NA other downstream 1786358 11418099 ~ 11418335 (-)
G1996632 NA other downstream 2280160 10922016 ~ 10924533 (-)
G1994812 NA other downstream 3703040 9500716 ~ 9501653 (-)
G1994786 NA other downstream 3756199 9447593 ~ 9448494 (-)
G1994674 NA other downstream 4023988 9177038 ~ 9180705 (-)
G1999856 NA other upstream 132417 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 315768 13520686 ~ 13521520 (-)
G2000052 NA other upstream 424866 13629784 ~ 13630075 (-)
G2000879 NA other upstream 1073223 14278141 ~ 14278746 (-)

Expression



Co-expression Network