G2000114


Basic Information

Item Value
gene id G2000114
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 13719404 ~ 13720581 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2288779
ccaccttcatgaggtactcacctggaatgtatttcaattaataggtgtgccttgttgaaagttaatttgtggaatttatttccttcttaacgtatctgagccaatcaattgtgttgtgacaaggtaggggtggtatacagaagatagccctatttggcaaaagaccaagtccatattatggcaagaacagctcaaataagtaaagagaaacaacagaccatcattactttaatagtcaatatggaacatttcaagaactttgaaagtttcttcaagtgcagtcgctatgatgaaactagctctcatgaggaccgccatagaaaaggaagatccagagttacctctgctgcagagaattgtcacgttcgtcatagtgaggagaccaaggcacagcgtgatttgaatacattcttcttttattaacgaagaacactaaacaaacaaacaaaaataacaaaacgaatgTGACGCTATGATAAACCgagtgctgacacaggcaactatgggtgggcatctaactttggtggcggctctggctCTGGACGCTGCCCCCCTTCTTTACATTGAGCCCTCCGCCCTCGTAGCAATgacccgtggatcatcgccggaggctcaTTACTGCGGATAATCGCTGGcaaccccggactggggaccttcGCTGGAGACCctgggctggggaccgtcgccggagacTCCAGCCggtgaccgtcgctggagaccccagCCGGGGACCATCACTGCATGGATCATCACCTCGatctcctcgtgtgcccccccacAAAGAAAaatattggggctgcctctcgggcttccgtgctagccgtgtacctTCATATCGTCGCCGTTCCTCTATTGTCTGGTATTTCTCCTCGTAGTAtcgccgttccgctttcgctgcctctctttcctcctcagaAAGGCGATACTCCCccggctgtgtccagggtcctgccCCATCCAATATTTCCTCATTAAATCAGTTCCATCTCCCCATTAAATGCTGCTCCTCCTTTTCATGCTTCTTGGTCCTTGTTTGGTGGGGTATTCTGTCACATCCGTCatagtgaggagaccaaggcgcagcgtgatttgaatacattcttcttttattaacgaagaacactaaacaaactaacaaaaacaaaacTAACGTGAATCTATGATAAATTGAGTGCTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2288779 True 1178 lncRNA 0.47 1 13719404 13720581

Neighbor

gene id symbol gene type direction distance location
trmt61b trmt61b coding downstream 862740 12845479 ~ 12856664 (-)
LOC110506264 LOC106561878 coding downstream 884115 12776493 ~ 12835289 (-)
LOC118944583 NA coding downstream 927359 12791911 ~ 12792045 (-)
LOC118944582 NA coding downstream 937878 12781392 ~ 12781526 (-)
LOC110506260 LOC106561879 coding downstream 978461 12715303 ~ 12740943 (-)
LOC110506271 LOC106561903 coding upstream 597723 14318304 ~ 14368873 (-)
LOC110506081 prmt3 coding upstream 656837 14377418 ~ 14496552 (-)
LOC110506276 LOC106587060 coding upstream 893005 14613586 ~ 14678505 (-)
LOC110506082 LOC106561908 coding upstream 982527 14703108 ~ 14788733 (-)
LOC110506277 NA coding upstream 1173914 14894495 ~ 14898577 (-)
G2000113 NA non-coding downstream 884 13718097 ~ 13718520 (-)
G2000112 NA non-coding downstream 3989 13715135 ~ 13715415 (-)
G2000096 NA non-coding downstream 26935 13692268 ~ 13692469 (-)
G2000068 NA non-coding downstream 70160 13649039 ~ 13649244 (-)
G2000049 NA non-coding downstream 92025 13627027 ~ 13627379 (-)
G2000115 NA non-coding upstream 167 13720748 ~ 13722220 (-)
G2000125 NA non-coding upstream 7649 13728230 ~ 13728444 (-)
G2000251 NA non-coding upstream 101199 13821780 ~ 13822120 (-)
G2000252 NA non-coding upstream 102133 13822714 ~ 13822914 (-)
G2000253 NA non-coding upstream 102473 13823054 ~ 13823407 (-)
G2000052 NA other downstream 89329 13629784 ~ 13630075 (-)
G1999980 LOC106561221 other downstream 197884 13520686 ~ 13521520 (-)
G1999856 NA other downstream 381253 13337335 ~ 13338151 (-)
G1996949 NA other downstream 2301069 11418099 ~ 11418335 (-)
G1996632 NA other downstream 2794871 10922016 ~ 10924533 (-)
G2000879 NA other upstream 557560 14278141 ~ 14278746 (-)
G2003219 LOC106561912 other upstream 1994967 15715548 ~ 15718308 (-)
nav2a LOC106587075 other upstream 2235046 15900960 ~ 16211028 (-)
G2003819 LOC106561933 other upstream 3000410 16720991 ~ 16723682 (-)

Expression


Co-expression Network