ostn (ostn)


Basic Information

Item Value
gene id ostn
gene name ostn
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 1192277 ~ 1232835 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587203.2
TCCCCAGAGTTCCCATTAGCAGGTAATAACCCCAGCCCTGGGGTGATGAGGATGAAAATGTCAGAGTGAGAGGGTTTAGGGAAAGGAgcagtggagcagtggaaaaCGAGGAGAAATGATGTCAGAGGAATCGCGACCACCGATTGGAGTGGAGATTCCAGAAGAGAGCCTATAAAACGGGGAAAGTCAACACCAGGAACAAGCAAAGGGAGGGAAAAGTTGGAACGTGAGAAATTCCAGGAACTTTTCAacatcctctctcttctcctgtgtgtgtgtaaatgtgtgttccAGACTATCTAAAACCAAAGatgcTGGGGTGTGTGCTTCTCTCGTGTCTCCTGACGGTGACTCTGTTCCACTGCAGCGTAGACAGCCTTCGCCTCACCCAGGAGAGCCCAGAGTACCTGGACCCGGTGGTTCTGGAGGAGTCAGGCCTGCAGGCCCGGTCCAGTGAGCAAAAGGCAGCAGGGGCTTTGACGGCCAAGTTACTACTACTTGACCACCTGGACCGCCTGGAGAACGATGTCATCGAGACCAAGATGAAGAGGAGCTTCCCAGGGTCCAACACTCCACTGGACCGCCTCTCCATCAGCACCATGGACCCTAAGGGCTCCAAGCAGAGGAAAGTTGTTGAACTGCCACGGAGGCGAGTGAGTGTTCCTATCGACCGGATCGGAGTGGGCCGTCTACCTAGCAGCCGAgggtagacccccccccccatccacccaTCCCCTTACTTGGACAGGGGATTCTACCACAGGTAGAAGACGCATGGAAAGCACATCAACACCCCACGACAACTCCTCTTGCCCTACCAACCCCCATCTCACCCCATCACCCTACATAAGTACACCATGGCACAAATCACTTCCTCGTTAAAGTTCTGATGTGAAGTAAAATACCCTCCCCCCACCCTTTCTCCCCACTTCCTTTCCCCGTCCTCAGTGGTGATACTGTGGGGGGATACAGTGTGGCAATGTCCTAAAAAGCACATCACTAACATAGCAACACACTTATTTACCCATAATGCCTGTGGGCACTCTTGCCTTTTTTGCTCGTTTGTAGTACATGCACACATGGTCTGTCTGTTCACTTTGACTGAAGGCTGACTGGGTGGCAATGGCCTTGACATTAAAAACTGATTATAAGACAACAA
>XM_021587202.2
CTCACCTCCCCCGGCCACCCAGCTACTCCCCAGAGTTCCCATTAGCAGGTAATAACCCCAGCCCTGGGGTGATGAGGATGAAAATGTCAGAGTGAGAGGGTTTAGGGAAAGGAgcagtggagcagtggaaaaCGAGGAGAAATGATGTCAGAGGAATCGCGACCACCGATTGGAGTGGAGATTCCAGAAGAGAGCCTATAAAACGGGGAAAGTCAACACCAGGAACAAGCAAAGGGAGGGAAAAGTTGGAACGTGAGAAATTCCAGGAACTTTTCAacatcctctctcttctcctgtgtgtgtgtaaatgtgtgttccAGACTATCTAAAACCAAAGGGAAGGGATGAGGTGTGTCCGGGTCCACATCCACCCCATTCTCACATTCAGGGCGGCGAGCCATGCCGAGCTCCCAGTATTTTCACAGATGGAGGCTGCGTAAAGatgcTGGGGTGTGTGCTTCTCTCGTGTCTCCTGACGGTGACTCTGTTCCACTGCAGCGTAGACAGCCTTCGCCTCACCCAGGAGAGCCCAGAGTACCTGGACCCGGTGGTTCTGGAGGAGTCAGGCCTGCAGGCCCGGTCCAGTGAGCAAAAGGCAGCAGGGGCTTTGACGGCCAAGTTACTACTACTTGACCACCTGGACCGCCTGGAGAACGATGTCATCGAGACCAAGATGAAGAGGAGCTTCCCAGGGTCCAACACTCCACTGGACCGCCTCTCCATCAGCACCATGGACCCTAAGGGCTCCAAGCAGAGGAAAGTTGTTGAACTGCCACGGAGGCGAGTGAGTGTTCCTATCGACCGGATCGGAGTGGGCCGTCTACCTAGCAGCCGAgggtagacccccccccccatccacccaTCCCCTTACTTGGACAGGGGATTCTACCACAGGTAGAAGACGCATGGAAAGCACATCAACACCCCACGACAACTCCTCTTGCCCTACCAACCCCCATCTCACCCCATCACCCTACATAAGTACACCATGGCACAAATCACTTCCTCGTTAAAGTTCTGATGTGAAGTAAAATACCCTCCCCCCACCCTTTCTCCCCACTTCCTTTCCCCGTCCTCAGTGGTGATACTGTGGGGGGATACAGTGTGGCAATGTCCTAAAAAGCACATCACTAACATAGCAACACACTTATTTACCCATAATGCCTGTGGGCACTCTTGCCTTTTTTGCTCGTTTGTAGTACATGCACACATGGTCTGTCTGTTCACTTTGACTGAAGGCTGACTGGGTGGCAATGGCCTTGACATTAAAAACTGATTATAAGACAACAA

Function

symbol description
ostn Predicted to enable signaling receptor binding activity. Acts upstream of or within cartilage development and endochondral ossification. Predicted to be active in extracellular space. Is expressed in corpuscles of Stannius; head; heart; and heart tube. Orthologous to human OSTN (osteocrin).

NR:

description
osteocrin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587203.2 False 1159 mRNA 0.52 5 1192277 1232809
XM_021587202.2 True 1290 mRNA 0.53 6 1192277 1232835

Neighbor

gene id symbol gene type direction distance location
col4a4 LOC106579782 coding downstream 171306 861498 ~ 1020971 (-)
defb4 NA coding downstream 375786 814467 ~ 816586 (-)
LOC110507299 LOC106580672 coding downstream 393031 787157 ~ 799246 (-)
LOC110507298 spcs2 coding downstream 416099 769005 ~ 776178 (-)
LOC110507297 LOC106580671 coding downstream 460692 695191 ~ 731585 (-)
LOC110507040 il-1racp coding upstream 88141 1320976 ~ 1343406 (-)
LOC110507309 fgf12 coding upstream 175352 1408187 ~ 1547213 (-)
LOC110507311 mb21d2 coding upstream 325103 1557938 ~ 1580617 (-)
LOC110507317 LOC106580633 coding upstream 615940 1848775 ~ 1875484 (-)
zgc:162872 LOC106580634 coding upstream 644833 1877668 ~ 1890486 (-)
G2039692 NA non-coding downstream 61109 1130908 ~ 1131168 (-)
G2039690 NA non-coding downstream 62831 1127754 ~ 1129446 (-)
G2039683 NA non-coding downstream 70416 1121651 ~ 1121861 (-)
G2039676 NA non-coding downstream 80713 1111297 ~ 1111564 (-)
G2039670 NA non-coding downstream 88394 1103668 ~ 1103883 (-)
G2039943 NA non-coding upstream 101020 1333855 ~ 1334089 (-)
G2039944 NA non-coding upstream 101305 1334140 ~ 1334358 (-)
G2039959 NA non-coding upstream 110887 1343722 ~ 1343988 (-)
G2040002 NA non-coding upstream 116949 1349784 ~ 1395586 (-)
G2040047 NA non-coding upstream 170587 1403422 ~ 1403907 (-)
G2041883 NA other upstream 1662741 2895576 ~ 2896391 (-)
G2041885 NA other upstream 1666152 2898987 ~ 2899388 (-)
G2042608 NA other upstream 2167744 3400579 ~ 3402997 (-)
LOC110507356 LOC106580682 other upstream 2306349 3539029 ~ 3718487 (-)
G2043460 NA other upstream 3110764 4343599 ~ 4348409 (-)

Expression


Co-expression Network