wdr95 (LOC106580697)


Basic Information

Item Value
gene id wdr95
gene name LOC106580697
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2432760 ~ 2465478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587246.2
TGCCCTTTAGATCTAATCCAAGGTTCTGTCTGCTTTGTGGAACAGACAATATTAGCAGAAATGCATCCAGTAGTTATCTTAGTATCTTAGTTACCAGGGAGTATCTTAGTTACCAGAGAGCCACCCACGTGAGTCCAGGTGAACTGTGTCAGGTAATGTGAGACCTTGAGAAGCAGAGGCTGTGCGCTGAACTGGTTCTGAAAGGCTGAGCTCCTCCATTTCCTCCACTCTAACAGACAAGTGAACACTGGACCAggctgacagacacacaaacagacacagacatacaaagACTACTGGGATGCCGCTGTGGAAAAAAAATCGCCCTTCTTCAGCTGCTGGGAAACTAGAGGCTCAGAATGTGTCCAGCGTCTTTGCTGAGCTGGGGAGTGCAGGAGAGCGAGGGACTAAGATGTCGGGGCCAGAGCAGCGGGGAGAGAGATCGGACCCTGGTGTCGTGAGGGTGTACCTGGGGGCCGTGTCAGAGGACAGGCCACCTCCTAAGTGGCTGGAGCGTGAGCTGCTGAGACAGGAGAACCGTCGCCACTCTGTTACCATGGGAGACCAGATCAAACTGAGGTCACGACTACTCTACAGTGACGATCCCACACACAGCCTCAGCAAGCTCAAGATTGAGCAGAGAGTATCCCTTGAAAGCCTGACAAAGCTCAAACTGGCATTTGAGGAATTTGAAATGGGTGGCCAAAGATCACTGGATGTGTTGAACTTTGGACTGATAGTGAAGAAGTGTTTGGGCTTACACAACATAAACAATGCCCAGATCCAAGAACTATTCATGAAGATCGATTATTCTGGCCAGGGGAGGATTGAATGGGATGAGTTCTGTACGTACATGCAGTTGGAGTACACAGAGAAGGAGGAGTCAGTGTTGCGCGGCAAACAGGTGGCATTCTCCCTGCCAGCCACGGTCAGGGCCCTAAGCCACGGAGAGCCCGTTCTGCGCGTCCACTCCACCCCCGATGGCACCATCATCACCGTCCGCGAGGATGGGGCTGTCTACTACTGGAGCCCCGAGCTCAACCTGAAGAGGAGCAagagcgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtcagtgaGTAGTTTTGAAGTGTGAGGAAGTAGACTTGGCCTTTTTTTATGTAGGACCACACCCTTCTCAGAGGGTGTGGTCCTAGTTTGGTCCTAATTTGGAAATGTCATAGTTTGGAAATGTGTTTTGAATTTTGCATCAATTAAATTCAATGATTTGCTTTGAATGCAGCATGAAAGACCTGTGAGCAGAAAACCAAAATGGGCAACTGATTTTATCACCATGCCACAGTACAACAAACTTATCATGGGAACAGGagacagagagatccagtTGTATGAGCTGTCCTCTCTAGAGCCGTACTGTCAGATCAGTTCCCTGGAGACAGTCCCTCTGAGACTGGACTACTGCTACACCGGACCTGATGAGTGTTCTATTTTGTATGGAGACTCCCAGGGCTGCGTGAATATCATATTAATTACCTCCGTGGGGGAGACTCTGagAATGTGGAAGAAATTACCAAAAATTGAGAATGTGCCTAACATCGGGATAGACAACGCAATGCTTTCTCAGAATGTGACATACATTCGATGGAAGGTCCACCAGGACTGGGTGACAAAGGTGAAATATTTTCCAGACATTTGTGCGATTGTTTCCACCTCCAATCATGAAGCCTCTTCCCTCGTCATAGGCTGCGTTCTCCCGTCCACCAACATCGAGCAGCAGATGAGGGAAATCAGGGAGGTGTGTCGGGATGGGAAGGCCAAGAGAGCCCTTTCTAATAACAATGGGTCTCCTCAGCCCCGGGCACCATGTGACCAGACCGTCTTCAATGTCTACAAGGGCGTCATGACCTTTGACCTCAGCAAACAGCACAACCTGCTGGTGACCGGAGGGATGGACAGGGTGCTACGTCTGTGGAACCCCTACGTCCCTGGGAAGCCCACAGGTGTGTTAAAGGGACACTCTGCTCCCATCTTCTACCTCTTCATCTCCTCAGAGGAAAACCGTATATTTTCTGTCTCTATGGACAACACTGCCAAGATATGGGATATCCATGACCAAATCTGCCTCTTCACAGCCCACCCCAAAGCCAGCCTCATCCGTGGAGACATGTCTGCATGCCTGTATTCTCCTTCCatcaaggcactgtacatcgcAGCTGACTCACTAGCGCTGCTCTCTCTCAGGACCAGCCCCCAGCCCCAGGGACATCTGATCGTGTCTCACATGGAGCCTGTGTTGTGCTGCGGCTATAGCCACGAGTTCAGACAGGTCGTCAGCTGCACAGAAGGATCCGTGGTGAAGGTGTGGGATTTCGACACAGGGAGCCATGTGTTTGAATTTGGTGGTGCCCACGGACAGTCTGCCATTACCTGTATGACTTTTGACCCCAAGGGAAGGAGACTGGTCACTGGGGGGAGAGATGGCATTCTAAAGATCTGGAACTTTAACAATGGTCAGTGTCTGAAGATACTAAAAAAAGATGGGGAGTCCAACGAGGTGTGTGACTGCACCTACCTGACAGTCCACAGAAACACGTATGTGATGTCTGTTGGATGGGACCGCAGGATTAATGTCTACTCTGATTCACCAGACGAGCCTCACCACATCCAGAAGCCTCAGCCCTCATGGCAAGACGATCTGAGGAGGGGCCACATAGAGGACATCCTGTGTGTGGCCCAGTGTCCCCCCTCCCTTCTAGCCACCAGCAGCTATGACGGGGAGGTCATTGTGTGGAACCTGGTCTCCGGACACATCCAGTGTCGCTTTGCCAGCCCTCTGCAACCTGACTGCTGCCATGCCCAAGGGATGGATACCTGTGTTCCCAGCATCATCTTCCTGAGGAGCCGAGCATTACATGCTAAGTTCTCCTCTGCTGCATGCCTCCTGTCCTCAGGACCCACAGGTTGCATTCATTTCTGGAACGTGCTCAACGGTGGGAAATTATTGGCCAACTTCGAGGCATCTAGGTTCCAGCAGCTGATCACTAAACTGGCAGTGACAAAGGAAGACACCTCACTGTATGCGGCTGATCAACTTGGCTATGTCTATGTTTATGACATAAAGACATACGCTCTTGGCTCAGAGAGAACCCCACCGAGAGCTGAAAACTACTGGCGTGCCCATACTGGCAGCATCACTGGGTTGCAGATTGTTGACGATGACCAAGTACTGCTCACCTCGTCTATAGACTGCACTGTGCGCCTGTGGAGTGCTGACGGAGAGTTCATAGGGACGTTTGGGCAGCGGGACAATTGGAGCATCCACACCCCTTCCTCCTGGAAGCATCCTGCCGTTCCCTATGAGATCCTGATCGACCCTCTGAGTATGCCAGCTCACCGCATCCTGGAGGGAGAGACCAGAGTGTCCGATGTCAATAACGCTGACAACTCTGAGGCCACTAGCACCGAGCAAAAGTCCAACTCGCCCAGCAAGCTTAGACACCCTCCACTGTCCTTCAGCGACACAGACATCATGGAGGAGATGAAAACCTCTTGTTACACAGAAGAACATGGGAAACGACTCCGACATGAAATATTCAAGCATACTAACAAGCCACCCAATCATGGCGGACCCAAGGCCTACCACACTCTCAAGTACTTTGATATCGTCGACACCCCAGCCACCTGCGAGAGGCCTGATCTTTCCCTGGCTGGCATAGATCCTTTCATGTCCAGCTTTGTGGAGCAGGAGTTGACTGAATTCCAATAAGATCCCAATTGTAACAGGAACTCAAACTGTGACCATAGGTCCTGTGCACCATGAACTCAACATGCTTCAAGGACAGAGGAGTTACAACACCATCACAAGTAATCAGAAGAGCTGAAATGTGAGCTGTTGCACAACTTTAAAGAGTTGCACAGTACTGGATTGATTAGGGGAGACCGGGGTTTGTTGTAACACTTTTTTACTAATTAGTGTATTTCTCAGCACCAGTATATCTTACAAGACTATTTTCAATAAGATTAAGACCAAGGTCTTGGGTTGAATTGGGGACCATTTATATCCTCTTATATTATTCCAACATGGAGTTATAAGCCATTAAACATTCTCTGTCCACTTGTGACAACCTGGGCCCAGATTTACAAAACACTTCTTACGCAAGAATGTAAGAAGCTTcttaagaaaaaaaaagtaaataagaTAGTTCGTAAGTGCAATTCCTCAACAATATCTTAAGATGTAATGATTTTCTTACGAACTTCTCAAATATCTATTTACAAATCTTCTTAACCTGTCTGGGAACGGAGTtcacagccagtgaaattgcagggcgccaaatacaaatcaacagacaTCTCATGAATCAAATTTcccaaacatacaagtattaggcaccattttaaagataaaattctcgttaatccagccacagtgtcggacttaaaaaatgctttacagcgaaagctccacgaacgattatgttaggtcacca

Function

NR:

description
WD repeat-containing protein 49-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587246.2 True 4536 mRNA 0.49 29 2432760 2465478

Neighbor

gene id symbol gene type direction distance location
LOC110507325 LOC106612440 coding downstream 26542 2225711 ~ 2406218 (-)
LOC110507323 NA coding downstream 260973 1977082 ~ 2171787 (-)
n4bp2l2 LOC106580637 coding downstream 466109 1937827 ~ 1966651 (-)
trmt9b LOC106580636 coding downstream 499054 1906338 ~ 1933706 (-)
zgc:162872 LOC106580634 coding downstream 542274 1877668 ~ 1890486 (-)
LOC110507328 LOC106580643 coding upstream 53235 2518713 ~ 2542284 (-)
LOC110507043 LOC106603827 coding upstream 471050 2936528 ~ 2940847 (-)
LOC110507338 LOC106603753 coding upstream 480444 2945922 ~ 2956588 (-)
LOC118944748 NA coding upstream 491162 2956640 ~ 2961498 (-)
tsen34 tsen34 coding upstream 771923 3237401 ~ 3240233 (-)
G2041498 NA non-coding downstream 135101 2281840 ~ 2297659 (-)
G2041258 NA non-coding downstream 530972 1901568 ~ 1901788 (-)
G2041256 NA non-coding downstream 532549 1900001 ~ 1900211 (-)
G2041613 NA non-coding upstream 15168 2480646 ~ 2495700 (-)
G2041626 LOC106612439 non-coding upstream 31022 2496500 ~ 2498329 (-)
G2041710 NA non-coding upstream 162569 2628047 ~ 2628375 (-)
G2041725 LOC106584099 non-coding upstream 184016 2649494 ~ 2655785 (-)
G2041724 LOC106612432 non-coding upstream 204825 2670303 ~ 2685780 (-)
LOC110507298 spcs2 other downstream 1662023 769005 ~ 776178 (-)
G2041883 NA other upstream 430098 2895576 ~ 2896391 (-)
G2041885 NA other upstream 433509 2898987 ~ 2899388 (-)
G2042608 NA other upstream 935101 3400579 ~ 3402997 (-)
LOC110507356 LOC106580682 other upstream 1073706 3539029 ~ 3718487 (-)
G2043460 NA other upstream 1878121 4343599 ~ 4348409 (-)

Expression


Co-expression Network