Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944748 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 2956640 ~ 2961498 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005040049.1 | True | 298 | mRNA | 0.43 | 3 | 2956640 | 2961498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507338 | LOC106603753 | coding | downstream | 52 | 2945922 ~ 2956588 (-) |
| LOC110507043 | LOC106603827 | coding | downstream | 15793 | 2936528 ~ 2940847 (-) |
| LOC110507328 | LOC106580643 | coding | downstream | 414356 | 2518713 ~ 2542284 (-) |
| wdr95 | LOC106580697 | coding | downstream | 491162 | 2432760 ~ 2465478 (-) |
| LOC110507325 | LOC106612440 | coding | downstream | 550422 | 2225711 ~ 2406218 (-) |
| tsen34 | tsen34 | coding | upstream | 275903 | 3237401 ~ 3240233 (-) |
| LOC110507346 | eif2a | coding | upstream | 286312 | 3247810 ~ 3255113 (-) |
| LOC110507348 | LOC106580655 | coding | upstream | 320994 | 3282492 ~ 3308039 (-) |
| LOC110507349 | LOC106580654 | coding | upstream | 353587 | 3315085 ~ 3349977 (-) |
| gdpd1 | gdpd1 | coding | upstream | 396971 | 3358469 ~ 3384597 (-) |
| G2041914 | NA | non-coding | downstream | 21701 | 2934710 ~ 2934939 (-) |
| G2041912 | NA | non-coding | downstream | 23421 | 2932994 ~ 2933219 (-) |
| G2041908 | NA | non-coding | downstream | 28806 | 2927397 ~ 2927834 (-) |
| G2041907 | NA | non-coding | downstream | 29570 | 2926828 ~ 2927070 (-) |
| G2041902 | NA | non-coding | downstream | 37488 | 2918947 ~ 2919152 (-) |
| G2041920 | NA | non-coding | upstream | 5757 | 2967255 ~ 2967454 (-) |
| G2041966 | NA | non-coding | upstream | 17856 | 2979354 ~ 3031483 (-) |
| G2042207 | gpr171 | non-coding | upstream | 160337 | 3121835 ~ 3129456 (-) |
| G2042282 | NA | non-coding | upstream | 269388 | 3230886 ~ 3231240 (-) |
| G2042283 | NA | non-coding | upstream | 270567 | 3232065 ~ 3232276 (-) |
| G2041885 | NA | other | downstream | 57252 | 2898987 ~ 2899388 (-) |
| G2041883 | NA | other | downstream | 60249 | 2895576 ~ 2896391 (-) |
| LOC110507298 | spcs2 | other | downstream | 2185903 | 769005 ~ 776178 (-) |
| G2042608 | NA | other | upstream | 439081 | 3400579 ~ 3402997 (-) |
| LOC110507356 | LOC106580682 | other | upstream | 577686 | 3539029 ~ 3718487 (-) |
| G2043460 | NA | other | upstream | 1382101 | 4343599 ~ 4348409 (-) |
| G2043483 | NA | other | upstream | 1417436 | 4378934 ~ 4379429 (-) |
| G2043518 | NA | other | upstream | 1452567 | 4414065 ~ 4414423 (-) |
