rcbtb2 (rcbtb2)


Basic Information

Item Value
gene id rcbtb2
gene name rcbtb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 46536201 ~ 46571673 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965176.1
ATAATACATGAATTGCATCCATTGTTGCACCATGTGATCAATTATCAgctcaaaacatgttttatttacttttttcttCGTGTTTTTTTTCCCGGTGGAGTGCGTATTTATCCTGTTGTATGATTTAATTGAGGCCTGACAGCAGGTCAAACGAACAACTAAAATGATTGAATCACTCGGGAAAATGAATCATGACTCTTGAATCAGTAAAAAAAAGAGTCGTTCGTGAACTGCACATCTCTACTGAATAGCCAAGCAGCTTCCTCGGCTAGAGAAGGGATCCGCACTGTATTGTCACGGTTGGTTGGCACGCAATCCTCTGTCTTCCAGAAATGTGATCGCTTTTTAACTCGATTTGCCATATGAAAATGTTAGGGAGTCGCCGACATCACCGTCTGAACCGACGACATCGTTGACGAATAGCACAACAACGCCGGGTATTATGCTGGACGTGGGGAAGTGGCCAGTGTTTGCTCTCCTGCCTCCAGAGGAACTGCGTCTGATACGACAGGCCTGTGTGTTCGGCAGCGCTGCCAACGAAGCCCTCTATGTCACCGTCAACGATGAGGTGTTTGCCCTGGGCACCAACTGTAGTGGCTGTCTGGGTCTGGGGGACCTGCAGAGTACCATAGAGCCCCGCAGGATCGACGTGCTATGTGGGAAGAAAATAGTCTCTCTGAGCTACGGAACCGGACCACATGTCGTCATCGCTACTGCCGACGGAGAGGTGTTTGCCTGGGGACACAACGGCTACAGCCAGCTGGGAAATGGGACCACCAACCATGGCTTGACCCCAGCCCAGGTCTCCACTAACCTGCTCAACAAGAGGGTGACGGAGGTGGCCTGTGGCTCTCACCACACCATCGCCCTCACTACCGACGGAGAGgtgttTGCATGGGGCTACAACAACTCTGGCCAGGTGGGGTCAGGGTCGACGGCCAACCAGCCCACGCCGCGTCGGGTCAGCAGCTGCCTGCAGAACAAAGTGGTGGTTAATATCGCCTGTGGTCAGCTCTGTTCCATGGCTGTGCTGGACAATGGAGAGACCTATGGTTGGGGCTATAACTGCAACGGGCAGCTTGGTCTGGGCAACAATGGGAACCAGCAGACCCCGTGTAGGATCGCAGCTCTACAGGGAGTCAACATTATACAGGTTGCTTGTGGCTACGCACATACGCTGGCGCTGACAGACGAGGGCTTTATTTACGCTTGGGGGGCCAACTCTTATGGCCAGCTGGGGACAGGCAATAAGAGTAACCAGGCTGTCCCTACACTCATCAACACAGACAAGGAGAGGATGGTGGAGGTGGCAGCGTGCCACACCAGCCATACGTCTGCAGCTAAGACTCAGAGCGGTCAGGTGCTGATGTGGGGTCAGTGTAGGGGTCAAGCTGTAGCCTGCCCTCACCTCACTCACTTCGCCAGCACTGACGATGTCTTTGCTTGCTTCGCTACGCCCGCTGTCACATGGCATCTCCTCACCGTGGACGGTGATGACTATCTGACGGTGGCCCAGTCTCTGAAGAGGGAGTTTGACAGCCCGGACATCTCAGATCTCAAGTTCCTTGTGGATGGAAAGTGTATCCACGTACACAAAGCCCTCCTAAAGATCAGGTGTGAACATTTCCGTGTGTTGCTGAACGAGACAGACGAGGAGTCTATTGAGATTCACCAGTTCTCTTACCTGGTCTACAGGGCCTTCCTCGAATACCTTTACACAGACACCATCAACCTGCCTCCGGAGGACGCCATAGGTCTCCTGGACTTAGCTACGTTCTACCGTGAGACGCGTCTGAAGAGACTGTGTCAGGAGACCATCAAGAGAGGCATCTCTGAGGAAAACGCCATTACACTGCTCTCTGCTGCCGTCAAGTACGAGGCCAGGGACCTGGAAGAGTTCTGCTTCAAGTTCTGTGTCAACCACCTGACAGCTGTTACGCAGACGCAGGCCTTCGCCGACATGGACCACGAGCTGCTGAAGGCCTTCATCAGTAAAGCTAGCCGATATGGGGCCTTCAAAAACTGACTGGTCGACAGCCCACTAGCTAAGACTCTGGGTTAAGAGACTGGGGAATGGGTgagggggatggggggagtgGGATGGAG
>XM_036965177.1
CTCATTTCGTTCATTTGAGAAAATAATGCATAGGGCACGCAGGACTCTCTACCGGTGAATAATGAACTGGAAATTCGTCATGATTTTACAAGTCTCTCGTTCACCACAAGGGGTTTATTGGATCTGTTATTTGTGACTGAGACTTGTAAAAGTGTGCGTTAATAAACAATGTACATGTATTTGTTGATACATTTGAAACAAGGTCTAGTTGTGTCAGCAGCTGGACTAGTTTGTGAACGACTCTTGGTGGAAGGCATTGCCTGACTGCTATGAAGGTGATTATGGTTCCAACTGCAACACCCCAAACGATTCGTTCTCGAGTTCGTTGACAACGGGAGTATTATGCTGGACGTGGGGAAGTGGCCAGTGTTTGCTCTCCTGCCTCCAGAGGAACTGCGTCTGATACGACAGGCCTGTGTGTTCGGCAGCGCTGCCAACGAAGCCCTCTATGTCACCGTCAACGATGAGGTGTTTGCCCTGGGCACCAACTGTAGTGGCTGTCTGGGTCTGGGGGACCTGCAGAGTACCATAGAGCCCCGCAGGATCGACGTGCTATGTGGGAAGAAAATAGTCTCTCTGAGCTACGGAACCGGACCACATGTCGTCATCGCTACTGCCGACGGAGAGGTGTTTGCCTGGGGACACAACGGCTACAGCCAGCTGGGAAATGGGACCACCAACCATGGCTTGACCCCAGCCCAGGTCTCCACTAACCTGCTCAACAAGAGGGTGACGGAGGTGGCCTGTGGCTCTCACCACACCATCGCCCTCACTACCGACGGAGAGgtgttTGCATGGGGCTACAACAACTCTGGCCAGGTGGGGTCAGGGTCGACGGCCAACCAGCCCACGCCGCGTCGGGTCAGCAGCTGCCTGCAGAACAAAGTGGTGGTTAATATCGCCTGTGGTCAGCTCTGTTCCATGGCTGTGCTGGACAATGGAGAGACCTATGGTTGGGGCTATAACTGCAACGGGCAGCTTGGTCTGGGCAACAATGGGAACCAGCAGACCCCGTGTAGGATCGCAGCTCTACAGGGAGTCAACATTATACAGGTTGCTTGTGGCTACGCACATACGCTGGCGCTGACAGACGAGGGCTTTATTTACGCTTGGGGGGCCAACTCTTATGGCCAGCTGGGGACAGGCAATAAGAGTAACCAGGCTGTCCCTACACTCATCAACACAGACAAGGAGAGGATGGTGGAGGTGGCAGCGTGCCACACCAGCCATACGTCTGCAGCTAAGACTCAGAGCGGTCAGGTGCTGATGTGGGGTCAGTGTAGGGGTCAAGCTGTAGCCTGCCCTCACCTCACTCACTTCGCCAGCACTGACGATGTCTTTGCTTGCTTCGCTACGCCCGCTGTCACATGGCATCTCCTCACCGTGGACGGTGATGACTATCTGACGGTGGCCCAGTCTCTGAAGAGGGAGTTTGACAGCCCGGACATCTCAGATCTCAAGTTCCTTGTGGATGGAAAGTGTATCCACGTACACAAAGCCCTCCTAAAGATCAGGTGTGAACATTTCCGTGTGTTGCTGAACGAGACAGACGAGGAGTCTATTGAGATTCACCAGTTCTCTTACCTGGTCTACAGGGCCTTCCTCGAATACCTTTACACAGACACCATCAACCTGCCTCCGGAGGACGCCATAGGTCTCCTGGACTTAGCTACGTTCTACCGTGAGACGCGTCTGAAGAGACTGTGTCAGGAGACCATCAAGAGAGGCATCTCTGAGGAAAACGCCATTACACTGCTCTCTGCTGCCGTCAAGTACGAGGCCAGGGACCTGGAAGAGTTCTGCTTCAAGTTCTGTGTCAACCACCTGACAGCTGTTACGCAGACGCAGGCCTTCGCCGACATGGACCACGAGCTGCTGAAGGCCTTCATCAGTAAAGCTAGCCGATATGGGGCCTTCAAAAACTGACTGGTCGACAGCCCACTAGCTAAGACTCTGGGTTAAGAGACTGGGGAATGGGTgagggggatggggggagtgGGATGGAG
>XM_036965178.1
CTCATTTCGTTCATTTGAGAAAATAATGCATAGGGCACGCAGGACTCTCTACCGGTGAATAATGAACTGGAAATTCGTCATGATTTTACAAGTCTCTCGTTCACCACAAGGGGTTTATTGGATCTGTTATTTGTGACTGAGACTTGTAAAAGTGTGCGTTAATAAACAATGTACATGTATTTGTTGATACATTTGAAACAAGGTCTAGTTGTGTCAGCAGCTGGACTAGTTTGTGAACGACTCTTGGTGGAAGGCATTGCCTGACTGCTATGAAGTATTATGCTGGACGTGGGGAAGTGGCCAGTGTTTGCTCTCCTGCCTCCAGAGGAACTGCGTCTGATACGACAGGCCTGTGTGTTCGGCAGCGCTGCCAACGAAGCCCTCTATGTCACCGTCAACGATGAGGTGTTTGCCCTGGGCACCAACTGTAGTGGCTGTCTGGGTCTGGGGGACCTGCAGAGTACCATAGAGCCCCGCAGGATCGACGTGCTATGTGGGAAGAAAATAGTCTCTCTGAGCTACGGAACCGGACCACATGTCGTCATCGCTACTGCCGACGGAGAGGTGTTTGCCTGGGGACACAACGGCTACAGCCAGCTGGGAAATGGGACCACCAACCATGGCTTGACCCCAGCCCAGGTCTCCACTAACCTGCTCAACAAGAGGGTGACGGAGGTGGCCTGTGGCTCTCACCACACCATCGCCCTCACTACCGACGGAGAGgtgttTGCATGGGGCTACAACAACTCTGGCCAGGTGGGGTCAGGGTCGACGGCCAACCAGCCCACGCCGCGTCGGGTCAGCAGCTGCCTGCAGAACAAAGTGGTGGTTAATATCGCCTGTGGTCAGCTCTGTTCCATGGCTGTGCTGGACAATGGAGAGACCTATGGTTGGGGCTATAACTGCAACGGGCAGCTTGGTCTGGGCAACAATGGGAACCAGCAGACCCCGTGTAGGATCGCAGCTCTACAGGGAGTCAACATTATACAGGTTGCTTGTGGCTACGCACATACGCTGGCGCTGACAGACGAGGGCTTTATTTACGCTTGGGGGGCCAACTCTTATGGCCAGCTGGGGACAGGCAATAAGAGTAACCAGGCTGTCCCTACACTCATCAACACAGACAAGGAGAGGATGGTGGAGGTGGCAGCGTGCCACACCAGCCATACGTCTGCAGCTAAGACTCAGAGCGGTCAGGTGCTGATGTGGGGTCAGTGTAGGGGTCAAGCTGTAGCCTGCCCTCACCTCACTCACTTCGCCAGCACTGACGATGTCTTTGCTTGCTTCGCTACGCCCGCTGTCACATGGCATCTCCTCACCGTGGACGGTGATGACTATCTGACGGTGGCCCAGTCTCTGAAGAGGGAGTTTGACAGCCCGGACATCTCAGATCTCAAGTTCCTTGTGGATGGAAAGTGTATCCACGTACACAAAGCCCTCCTAAAGATCAGGTGTGAACATTTCCGTGTGTTGCTGAACGAGACAGACGAGGAGTCTATTGAGATTCACCAGTTCTCTTACCTGGTCTACAGGGCCTTCCTCGAATACCTTTACACAGACACCATCAACCTGCCTCCGGAGGACGCCATAGGTCTCCTGGACTTAGCTACGTTCTACCGTGAGACGCGTCTGAAGAGACTGTGTCAGGAGACCATCAAGAGAGGCATCTCTGAGGAAAACGCCATTACACTGCTCTCTGCTGCCGTCAAGTACGAGGCCAGGGACCTGGAAGAGTTCTGCTTCAAGTTCTGTGTCAACCACCTGACAGCTGTTACGCAGACGCAGGCCTTCGCCGACATGGACCACGAGCTGCTGAAGGCCTTCATCAGTAAAGCTAGCCGATATGGGGCCTTCAAAAACTGACTGGTCGACAGCCCACTAGCTAAGACTCTGGGTTAAGAGACTGGGGAATGGGTgagggggatggggggagtgGGATGGAG
>XM_036965179.1
TTCAATAATACATGAATTGCATCCATTGTTGCACCATGTGATCAATTATCAgctcaaaacatgttttatttacttttttcttCGTGTTTTTTTTCCCGGTGGAGTGCGTATTTATCCTGTTGTATGATTTAATTGAGGCCTGACAGCAGGTCAAACGAACAACTAAAATGATTGAATCACTCGGGAAAATGAATCATGACTCTTGAATCAGTAAAAAAAAGAGTCGTTCGTGAACTGCACATCTCTACTGAATAGCCAAGCAGCTTCCTCGGCTAGAGAAGGGATCCGCACTGTATTGTCACGGTTGGTTGGCACGCAATCCTCTGTCTTCCAGAAATGTGATCGCTTTTTAACTCGATTTGCCATATGAAAATGTTAGGGAGTCGCCGACATCACCGTCTGAACCGACGACATCGTTGACGAATAGCACAACAACGCCGGGTATTATGCTGGACGTGGGGAAGTGGCCAGTGTTTGCTCTCCTGCCTCCAGAGGAACTGCGTCTGATACGACAGGCCTGTGTGTTCGGCAGCGCTGCCAACGAAGCCCTCTATGTCACCGTCAACGATGAGGTGTTTGCCCTGGGCACCAACTGTAGTGGCTGTCTGGGTCTGGGGGACCTGCAGAGTACCATAGAGCCCCGCAGGATCGACGTGCTATGTGGGAAGAAAATAGTCTCTCTGAGCTACGGAACCGGACCACATGTCGTCATCGCTACTGCCGACGGAGAGGTGTTTGCCTGGGGACACAACGGCTACAGCCAGCTGGGAAATGGGACCACCAACCATGGCTTGACCCCAGCCCAGGTCTCCACTAACCTGCTCAACAAGAGGGTGACGGAGGTGGCCTGTGGCTCTCACCACACCATCGCCCTCACTACCGACGGAGAGgtgttTGCATGGGGCTACAACAACTCTGGCCAGGTGGGGTCAGGGTCGACGGCCAACCAGCCCACGCCGCGTCGGGTCAGCAGCTGCCTGCAGAACAAAGTGGTGGTTAATATCGCCTGTGGTCAGCTCTGTTCCATGGCTGTGCTGGACAATGGAGAGACCTATGGTTGGGGCTATAACTGCAACGGGCAGCTTGGTCTGGGCAACAATGGGAACCAGCAGACCCCGTGTAGGATCGCAGCTCTACAGGGAGTCAACATTATACAGGTTGCTTGTGGCTACGCACATACGCTGGCGCTGACAGACGAGGGCTTTATTTACGCTTGGGGGGCCAACTCTTATGGCCAGCTGGGGACAGGCAATAAGAGTAACCAGGCTGTCCCTACACTCATCAACACAGACAAGGAGAGGATGGTGGAGGTGGCAGCGTGCCACACCAGCCATACGTCTGCAGCTAAGACTCAGAGCGGTCAGGTGCTGATGTGGGGTCAGTGTAGGGGTCAAGCTGTAGCCTGCCCTCACCTCACTCACTTCGCCAGCACTGACGATGTCTTTGCTTGCTTCGCTACGCCCGCTGTCACATGGCATCTCCTCACCGTGGACGGTGATGACTATCTGACGGTGGCCCAGTCTCTGAAGAGGGAGTTTGACAGCCCGGACATCTCAGATCTCAAGTTCCTTGTGGATGGAAAGTGTATCCACGTACACAAAGCCCTCCTAAAGATCAGGTGTGAACATTTCCGTGTGTTGCTGAACGAGACAGACGAGGAGTCTATTGAGATTCACCAGTTCTCTTACCTGGTCTACAGGGCCTTCCTCGAATACCTTTACACAGACACCATCAACCTGCCTCCGGAGGACGCCATAGGTCTCCTGGACTTAGCTACGTTCTACCGTGAGACGCGTCTGAAGAGACTGTGTCAGGAGACCATCAAGAGAGGCATCTCTGAGGAAAACGCCATTACACTGCTCTCTGCTGCCGTCAAGTACGAGGCCAGGCGCTGACCACTGACCAGCCATCCATCTCCCTGTTCCTCCTACAGGACCTGGAAGAGTTCTGCTTCAAGTTCTGTGTCAACCACCTGACAGCTGTTACGCAGACGCAGGCCTTCGCCGACATGGACCACGAGCTG

Function

symbol description
rcbtb2 Orthologous to human RCBTB2 (RCC1 and BTB domain containing protein 2).

NR:

description
RCC1 and BTB domain-containing protein 2-like

GO: NA

KEGG:

id description
K11494 RCBTB; RCC1 and BTB domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965176.1 False 2106 mRNA 0.53 12 46536201 46571285
XM_036965177.1 False 2006 mRNA 0.54 12 46536201 46571673
XM_036965178.1 False 1943 mRNA 0.54 12 46536201 46571673
XM_036965179.1 True 2023 mRNA 0.53 12 46536332 46571289

Neighbor

gene id symbol gene type direction distance location
lpar6a LOC106592078 coding downstream 38315 46409330 ~ 46497886 (-)
LOC110515379 NA coding downstream 171073 46362662 ~ 46365128 (-)
cog6 cog6 coding downstream 338972 46012193 ~ 46197229 (-)
slc25a15a LOC106581545 coding downstream 834617 45687954 ~ 45701584 (-)
stoml3a LOC104925222 coding downstream 850088 45673501 ~ 45686113 (-)
LOC118944689 NA coding upstream 196975 46768648 ~ 46770702 (-)
ndufc2 nduc2 coding upstream 400908 46972581 ~ 46975116 (-)
LOC118944730 NA coding upstream 454486 47026159 ~ 47026384 (-)
LOC110515838 NA coding upstream 1036885 47608558 ~ 47609889 (-)
LOC118944731 NA coding upstream 2213121 48784794 ~ 48792946 (-)
G2088121 NA non-coding downstream 10595 46510111 ~ 46525606 (-)
G2088122 NA non-coding downstream 21147 46511539 ~ 46515054 (-)
G2088106 NA non-coding downstream 72159 46461448 ~ 46464042 (-)
G2088105 NA non-coding downstream 74817 46457697 ~ 46461384 (-)
G2088177 NA non-coding upstream 89769 46661442 ~ 46662079 (-)
G2088194 NA non-coding upstream 123615 46695288 ~ 46696254 (-)
G2088220 NA non-coding upstream 167362 46739035 ~ 46741828 (-)
G2088199 NA non-coding upstream 183273 46754946 ~ 46761967 (-)
G2088242 NA non-coding upstream 221447 46793120 ~ 46794378 (-)
G2087288 NA other downstream 737871 45797070 ~ 45798330 (-)
G2087090 LOC106593344 other downstream 1005421 45530356 ~ 45530780 (-)
G2086783 NA other downstream 1614889 44920909 ~ 44921312 (-)
G2085726 NA other downstream 2623521 43912160 ~ 43912680 (-)
G2084740 LOC106613316 other downstream 3751166 42784627 ~ 42785035 (-)
G2088345 NA other upstream 432192 47003865 ~ 47004875 (-)
G2088531 NA other upstream 681002 47252675 ~ 47253186 (-)
G2088739 NA other upstream 972630 47544303 ~ 47550500 (-)
G2089393 NA other upstream 1221923 47793596 ~ 47794379 (-)

Expression


Co-expression Network